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HipSci | Human Induced Pluripotent Stem Cell Initiative

HipSci brings together diverse constituents in genomics, proteomics, cell biology and clinical genetics to create a UK national iPS cell resource and use it to carry out cellular genetic studies.

http://www.hipsci.org/

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CONTACTS AT HIPSCI.ORG

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pu●●●●●●●●@ebi.ac.uk

View this contact

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Julie Mace

Wellcome ●●●●●●●●●me Campus

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pu●●●●●●●●@ebi.ac.uk

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HipSci | Human Induced Pluripotent Stem Cell Initiative | hipsci.org Reviews
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HipSci brings together diverse constituents in genomics, proteomics, cell biology and clinical genetics to create a UK national iPS cell resource and use it to carry out cellular genetic studies.
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HipSci | Human Induced Pluripotent Stem Cell Initiative | hipsci.org Reviews

https://hipsci.org

HipSci brings together diverse constituents in genomics, proteomics, cell biology and clinical genetics to create a UK national iPS cell resource and use it to carry out cellular genetic studies.

INTERNAL PAGES

hipsci.org hipsci.org
1

iPS cells for Rare disease cases: call for proposals

http://www.hipsci.org/ips-cells-rare-disease-cases-call-proposals

Human Induced Pluripotent Stem Cells Initiative. IPS cells for Rare disease cases: call for proposals. IPS cells for Rare disease cases: call for proposals. Sample providers will receive back the iPSC produced to allow them to work with their cell lines, but the lines will also be available via a stem cell bank under an MTA to others for research purposes, either in academia or industry. We are in the process of obtaining overarching ethics permission for the genetic disease component of the study, s...

2

Participants

http://www.hipsci.org/participants

Human Induced Pluripotent Stem Cells Initiative. Fiona is Director of the Centre for Stem Cells and Regenerative Medicine at the King’s College London School of Medicine Centre. For Stem Cells and Regenerative Medicine. Richard is Joint Head of Human Genetics at the Wellcome Trust Sanger Institute. And leader of the Genome Informatics group. Daniel’s research at the Wellcome Trust Sanger Institute. Angus is Professor of Biochemistry at the Centre for Gene Regulation and Expression, University of Dundee.

3

Data Navigation

http://www.hipsci.org/data-navigation

Human Induced Pluripotent Stem Cells Initiative. The Lines and Data. Page gives an overview of HipSci cell lines and assay data that are publicly available. This page provides links to HipSci data on the project ftp site, in the EGA archive, and in the BioSamples archive. Open-access data are available on the HipSci ftp site: ftp:/ ftp.hipsci.ebi.ac.uk/vol1/ftp/. And register for access via WTSI’s Electronic Data Access Mechanism. HipSci cell lines and donors are registered in BioSamples in a HipSci group.

4

Project Wiki

http://www.hipsci.org/project-wiki

Human Induced Pluripotent Stem Cells Initiative. The Hipsci project has a confluence wiki hosted by the EBI. This is a project specific wiki and contains meeting minutes and other project specific documents. If you are a member of the HipSci consortium and do not have a login please email hipsci@ebi.ac.uk. Cell lines and data browser. Proteomics data made public via the PRIDE database. June 07, 2016. Common genetic variation drives molecular heterogeneity in human iPSCs. May 26, 2016. April 15, 2016.

5

All Announcements

http://www.hipsci.org/announcements

Human Induced Pluripotent Stem Cells Initiative. Proteomics data made public via the PRIDE database. June 07, 2016. The first release of HipSci proteomics mass spectrometry data. Is now publicly available. Proteomics data for 18 iPS cell lines are available via the PRIDE. Database under ProteomeXchange accession PXD003903. This pilot data submission supports the proteomics analyses in our recent paper Common genetic variation drives molecular heterogeneity in human iPSCs. The PRIDE project page. Has publ...

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hpscreg.eu hpscreg.eu

Projects · hPSCreg

https://hpscreg.eu/browse/projects

EU-funded projects using hPSC. 1st Sep 2017 - 31st Aug 2022. Probing the Reversibility of Autism Spectrum Disorders by Employing in vivo and in vitro Models. Http:/ gnovarino.wixsite.com/novarino-lab. 1st Mar 2017 - 28th Feb 2022. Microglia action towards neuronal circuit formation and function in health and disease. Http:/ ist.ac.at/research/life-sciences/siegert-group/. 1st Jan 2017 - 1st Jan 2022. Decoding the Epigenomic Regulatory Code by the Use of Single Cell Technologies. Http:/ www.pdn.ca...1st J...

gavinband.wordpress.com gavinband.wordpress.com

Slept like a... | (…a blog) | Page 2

https://gavinband.wordpress.com/page/2

Slept like a…. GEM 2014 – Day two. June 11, 2014. 8230;I crawl out of bed and get on the bus bleary-eyed. Eat breakfast and we’re into day two (see also days one. Using ‘simple sequence repeats’ (SSR) based on sequencing. He is arguing that micro satellite diversity is higher than for SNPs so it’s a more powerful tool for determination of fine-resolution population structure. Now signatures of positive selection. Daouda Ndiaye –. Bar plot showing that highest incidence is in south of Senegal. Coartem.

genomeinformatician.blogspot.com genomeinformatician.blogspot.com

Ewan's Blog: Bioinformatician at large: November 2014

http://genomeinformatician.blogspot.com/2014_11_01_archive.html

Ewan's Blog: Bioinformatician at large. Friday, 21 November 2014. Another step into Quantitative Genetics. Today sees the publication of the paper. By Zhihao Ding, YunYun Ni, Sander Timmer and colleagues (including myself) on local sequence effects and different modes of X-chromosome association as revealed by the. Quantitative genetics of CTCF binding. Stepping back into quantitative genetics. RNA Fish for X chromosome inactivation. In 1921, highlighted by a great editor's comment. Reading some of t...

wattlab.org wattlab.org

wattlab | useful links

http://www.wattlab.org/useful-links.html

Stem cells in their environment. Follow us on Twitter: @KCLstemcells. Visit our Facebook page. Centre for Stem Cells and Regenerative Medicine, King's College London. Human Induced Pluripotent Stem Cells Initiative. Optimization of Stem cell Therapy for degenerative Epithelial and Muscle Diseases. King's College London Stem Cell Research. The NIHR Biomedical Research Centre at Guy's and St Thomas' NHS Foundation Trust and King's College London. Nikon Imaging Centre at King's.

wattlab.org wattlab.org

wattlab | hipsci

http://www.wattlab.org/hipsci.html

Stem cells in their environment. Human induced pluripotent stem cells initiative (hipsci). Induced pluripotent stem cells colonies (in false colours) are distinguished from feeders via automated image analysis. Credit: Oliver Culley, Andreas Reimer, Darrick Hansen, HipSci Cell Phenotyping. The Human Induced Pluripotent Stem Cells Initiative. HipSci) brings together clinical genetics with genomics, proteomics and cell biology to create a UK national iPS cell resource to carry out cellular genetic studies.

ukrmp.org.uk ukrmp.org.uk

UK Regenerative Medicine Platform » Links

http://www.ukrmp.org.uk/links

Cell behaviour, differentiation and manufacturing Hub. Engineering and exploiting the stem cell niche. Safety and efficacy, focusing on imaging technologies. Acellular (smart material) approaches for therapeutic delivery. News & Events. UK Regenerative Medicine Conference. Reports, Papers and Documents. UK Regenerative Medicine Platform. MRC website – Regenerative Medicine And Stem Cells. Innovate UK (formerly Technology Strategy Board). Cell and Gene Therapy Catapult. Innovation office inquiry form.

gavinband.wordpress.com gavinband.wordpress.com

GEM 2014 – Day two | Slept like a...

https://gavinband.wordpress.com/2014/06/11/gem-2014-day-two

Slept like a…. GEM 2014 – Day two. June 11, 2014. 8230;I crawl out of bed and get on the bus bleary-eyed. Eat breakfast and we’re into day two (see also days one. Using ‘simple sequence repeats’ (SSR) based on sequencing. He is arguing that micro satellite diversity is higher than for SNPs so it’s a more powerful tool for determination of fine-resolution population structure. Now signatures of positive selection. Daouda Ndiaye –. Bar plot showing that highest incidence is in south of Senegal. Coartem.

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