hpc.uchc.edu

compbiogrid.org

Richard D. BerlinCenter for Cell Analysis & Modeling › UConn Health

http://www.compbiogrid.org/microscopy_facility/microscopy_facility.html

Richard D. Berlin. Center for Cell Analysis and Modeling. Software and Additional Equipment. This is a combined confocal/FCS/NLO system, mounted on an inverted Axio Observer Z1. The 780 employs the spectral 32-channel QUASAR GaAsp detector allowing for spectral imaging, maximum sensitivity photon counting and Fluorescence Correlation Spectroscopy (FCS) as well as two adjacent PMT's. This system is equiped with the following laser lines:. 458, 488, and 514. Diode Pumped Solid State (DPSS). Spinning Disk C...

compbiogrid.org

Richard D. BerlinCenter for Cell Analysis & Modeling › UConn Health

http://www.compbiogrid.org/index.html

Richard D. Berlin. Center for Cell Analysis and Modeling. The Richard D. Berlin Center for Cell Analysis and Modeling (CCAM),. At UConn Health, is developing new approaches for in vivo measurements and manipulation of molecular events within the cell, and new computational approaches to organize such data into quantitative models. To investigate the relationships between experimental and compuational worlds, we use a tripartite approach described as:. For nonlinear, confocal, and widefield microscopy.

compbiogrid.org

Richard D. BerlinCenter for Cell Analysis & Modeling › UConn Health

http://www.compbiogrid.org/resources/ccam_software.html

Richard D. Berlin. Center for Cell Analysis and Modeling. CCAM Software is produced by the faculty and staff of CCAM. Our flagship application, the Virtual Cell. Serves as a National Resource for Cell Analysis and Modeling. The software below ranges from applications for analyzing FRAP and other image data, (Virtual FRAP Tool, Microfilament Detector, 5D Visualization MicroApp) to tools for generating models (BioNetGen, SyBiL) and model parameters (Gfit). User Guide and Tutorial.

cbit.uchc.edu

Richard D. BerlinCenter for Cell Analysis & Modeling › UConn Health

http://cbit.uchc.edu/people/people.html

Richard D. Berlin. Center for Cell Analysis and Modeling. CCAM Faculty, Post-doctoral Fellows, Graduate Students and Staff.

bioinformatics.uconn.edu

Resources | Computational Biology Core

http://bioinformatics.uconn.edu/resources-and-events

Institute for Systems Genomics. Account and Support Reqest. Institute for Systems Genomics. Torrey Life Sciences Bldg., Rm. 75. 75 N Eagleville Rd, Unit-3043. Storrs, CT 06269-3043. Jeffrey W. Lary. E-mail: jeffrey.lary@uconn.edu. The Bioinformatics Facility Mailing List. To learn about courses, seminars, and related discussion groups. Follow us on Twitter. Institute of Systems Genomics. Center for Genome Innovation. UConn Health HPC Facility.

bioinformatics.uconn.edu

Internships | Computational Biology Core

http://bioinformatics.uconn.edu/resources-and-events/internships

Institute for Systems Genomics. Account and Support Reqest. Undergraduates and graduate students may apply here for a semester long internship supporting bioinformatics research projects on campus. Please describe your academic or other experience in the field of biology, in particular, background in genetics. Computer Science Experience *. Please describe your academic or other experience in the field of computer science, in particular, background in programming, UNIX, bioinformatics applications.

cbit.uchc.edu

Richard D. BerlinCenter for Cell Analysis & Modeling › UConn Health

http://cbit.uchc.edu/cam/cam.html

Richard D. Berlin. Center for Cell Analysis and Modeling. Cell Analysis and Modeling Training Program. The goals of the Cell Analysis and Modeling Training Program:. Develop a critical mass of trainees and scientists with interests in mathematical modeling and quantitative approaches in cell biology. Develop a diverse group of faculty mentors who will foster professional growth and interactions within the fields of chemistry, biophysics, computer science and the cell biology community.

cbit.uchc.edu

Richard D. BerlinCenter for Cell Analysis & Modeling › UConn Health

http://cbit.uchc.edu/facilities/facilities.html

Richard D. Berlin. Center for Cell Analysis and Modeling. Concentrations of specific molecular species and kinetic constants for molecular interactions are critical to quantitative knowledge of biological systems. These values can be analyzed in vitro using surface plasmon resonance (SPR) techniques with BIACORE equipment to measure binding of a soluble molecule to its immobilized ligand. These methods allow for high resolution analysis of binding kinetics of molecular interactions. They have...

cbit.uchc.edu

Richard D. BerlinCenter for Cell Analysis & Modeling › UConn Health

http://cbit.uchc.edu/index.html

Richard D. Berlin. Center for Cell Analysis and Modeling. The Richard D. Berlin Center for Cell Analysis and Modeling (CCAM),. At UConn Health, is developing new approaches for in vivo measurements and manipulation of molecular events within the cell, and new computational approaches to organize such data into quantitative models. To investigate the relationships between experimental and compuational worlds, we use a tripartite approach described as:. For nonlinear, confocal, and widefield microscopy.

ccam.uchc.edu

Richard D. BerlinCenter for Cell Analysis & Modeling › UConn Health

http://www.ccam.uchc.edu/resources/ccam_software.html

Richard D. Berlin. Center for Cell Analysis and Modeling. CCAM Software is produced by the faculty and staff of CCAM. Our flagship application, the Virtual Cell. Serves as a National Resource for Cell Analysis and Modeling. The software below ranges from applications for analyzing FRAP and other image data, (Virtual FRAP Tool, Microfilament Detector, 5D Visualization MicroApp) to tools for generating models (BioNetGen, SyBiL) and model parameters (Gfit). User Guide and Tutorial.