hpcgridrunner.github.io hpcgridrunner.github.io

hpcgridrunner.github.io

HPC GridRunner

HPC GridRunner includes generic support for Bioinformatics applications (see below), where the user would like to run some bioinformatics application on each sequence included in a large multi-fasta file, such as a blast search or a hmmer Pfam search. HPC GridRunner facilitates this by batching sequences to your liking and executing each blast or pfam search in parallel. Download HPC GridRunner here. The system runs as a set of Perl scripts, so there’s no need to compile anything. Cmd : the basic structu...

http://hpcgridrunner.github.io/

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HPC GridRunner | hpcgridrunner.github.io Reviews
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HPC GridRunner includes generic support for Bioinformatics applications (see below), where the user would like to run some bioinformatics application on each sequence included in a large multi-fasta file, such as a blast search or a hmmer Pfam search. HPC GridRunner facilitates this by batching sequences to your liking and executing each blast or pfam search in parallel. Download HPC GridRunner here. The system runs as a set of Perl scripts, so there’s no need to compile anything. Cmd : the basic structu...
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1 hpc gridrunner
2 installing hpc gridrunner
3 configuration
4 hpc conf/
5 is shown below
6 grid type grid=lsf
7 running hpc gridrunner
8 mycommands txt
9 cmds per node=1
10 echoxx hello4
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HPC GridRunner | hpcgridrunner.github.io Reviews

https://hpcgridrunner.github.io

HPC GridRunner includes generic support for Bioinformatics applications (see below), where the user would like to run some bioinformatics application on each sequence included in a large multi-fasta file, such as a blast search or a hmmer Pfam search. HPC GridRunner facilitates this by batching sequences to your liking and executing each blast or pfam search in parallel. Download HPC GridRunner here. The system runs as a set of Perl scripts, so there’s no need to compile anything. Cmd : the basic structu...

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HPC GridRunner includes generic support for Bioinformatics applications (see below), where the user would like to run some bioinformatics application on each sequence included in a large multi-fasta file, such as a blast search or a hmmer Pfam search. HPC GridRunner facilitates this by batching sequences to your liking and executing each blast or pfam search in parallel. Download HPC GridRunner here. The system runs as a set of Perl scripts, so there’s no need to compile anything. Cmd : the basic structu...

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