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iDASH | integrating Data for Analysis, Anonymization, and SHaring

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. Natural Language Processing (NLP) Ecosystem. A suite of installed NLP tools. PhenDisco - a new search tool for dbGaP. Learn About NLP Systems. Tutorials, Lectures, and Webinars. Access Clinical Text Data.

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iDASH | integrating Data for Analysis, Anonymization, and SHaring | idash-nlp.ucsd.edu Reviews

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Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. Natural Language Processing (NLP) Ecosystem. A suite of installed NLP tools. PhenDisco - a new search tool for dbGaP. Learn About NLP Systems. Tutorials, Lectures, and Webinars. Access Clinical Text Data.

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iDASH | integrating Data for Analysis, Anonymization, and SHaring | idash-nlp.ucsd.edu Reviews

https://idash-nlp.ucsd.edu

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. Natural Language Processing (NLP) Ecosystem. A suite of installed NLP tools. PhenDisco - a new search tool for dbGaP. Learn About NLP Systems. Tutorials, Lectures, and Webinars. Access Clinical Text Data.

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iDASH | integrating Data for Analysis, Anonymization, and SHaring

http://idash-nlp.ucsd.edu/umls-vm.php

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. NLP Virtual Machine Download. The following NLP software is installed on the VM:. An annotation interface for manually annotating text. A tool for indexing text to UMLS concepts. Automated Retrieval Console (ARC).

2

iDASH | integrating Data for Analysis, Anonymization, and SHaring

http://idash-nlp.ucsd.edu/journal-club.php

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. Automatic de-identification of textual documents in the electronic health record: a review of recent research. BoB, a best-of-breed automated text de-identification system for VHA clinical documents. Visualizatio...

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iDASH | integrating Data for Analysis, Anonymization, and SHaring

http://idash-nlp.ucsd.edu/nlp-tools-new.php

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. Listed below are several biomedical NLP Tools. EHOST: The Extensible Human Oracle Suite of Tools. EHOST is written in Java. Datasets that can be used:. Datasets that can be used:. BADREX uses dynamically generate...

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iDASH | integrating Data for Analysis, Anonymization, and SHaring

http://idash-nlp.ucsd.edu/media.php

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. Tutorials, Lectures and Articles, and Webinars and Videos. AMIA Tutorial on Clinical NLP: Part I (introduction). The Tarsqi Toolkit: Temporal Modeling for the news domain and the medical domain.

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iDASH | integrating Data for Analysis, Anonymization, and SHaring

http://idash-nlp.ucsd.edu/nlp-and-data-modeling.php

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. NLP and Data Modeling. Listed below are tools developed for NLP and Data Modeling. Click on the name in the left column to download or access the tools. IDASH Virtual Machine of Clinical NLP Tools. IDASH is suppo...

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PHI and PII Definition and Data Elements | iDASH

https://idash.ucsd.edu/phi-and-pii-definition-and-data-elements

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. PHI and PII Definition and Data Elements. PHI Definition and Data Elements. Below is an excerpt from the U.S. Department of Health and Human Services. That defines PHI and PHI data elements:. US Department of Com...

idash.ucsd.edu

Security Tips | iDASH

https://idash.ucsd.edu/security-tips

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. Listed below are suggestions to protect data using encryption:. Encrypting computer hard drives, files, or removable drives. SFTP (Secure File Transfer Protocol). These tools support the protocols listed above:.

idash.ucsd.edu

iDASH Team | iDASH

https://idash.ucsd.edu/team

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. MD, is Professor of Pediatrics in the UCSD School of Medicine and Director of the Kawasaki Disease Research Center at UCSD. In 2009 she received the Pioneer Award for Kawasaki Disease Research. Chosen for...Sheil...

idash.ucsd.edu

Publications | iDASH

https://idash.ucsd.edu/publications

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. Show only items where. Akers, Johnny C. And the iDASH team. Baker, Annette L. Bandos, Andriy I. Bell, Douglas S. Bell, Elizabeth A. Berty, Holly L. Bortone, Dante S. Boxwala, Aziz A. Breunis, Willemijn B. Maehara...

idash.ucsd.edu

Electronic Informed Consent | iDASH

https://idash.ucsd.edu/electronic-informed-consent

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. Informed CONsent for clinical record and Sample use in research (iCONS). ICONS aims to address the lack of a standard for capturing, reasoning, integrating. The goals of our research are:. Follow-up registry to i...

idash.ucsd.edu

iDASH 2013 Summer Internship Symposium | iDASH

https://idash.ucsd.edu/events/symposiums/idash-2013-summer-internship-symposium

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. IDASH 2013 Summer Internship Symposium. August 9, 2013. 10am-12pm (PT), 1pm-3pm (ET). Atkinson Hall (Calit2) auditorium, University of California San Diego. Nate Heintzman, PhD. Lucila Ohno-Machado, MD, PhD.

idash.ucsd.edu

Procedures | iDASH

https://idash.ucsd.edu/procedures

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. 1) Download the appropriate DUA. To download the DUA for any. Type of data contribution. If you are NOT from. And want download the DUA to access private or limited datasets. If you are from the UC System.

idash.ucsd.edu

iDASH and pSCANNER Data Sharing Symposium | iDASH

https://idash.ucsd.edu/events/symposiums/idash-and-pscanner-all-hands-symposium

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. IDASH and pSCANNER Data Sharing Symposium. 8AM-5PM; 8AM-5PM; 8AM-12PM. Atkinson Hall, UCSD Campus, La Jolla, California. Driving and walking directions to the meeting from nearby hotels can be found here.

idash.ucsd.edu

HIPAA and Security | iDASH

https://idash.ucsd.edu/hipaa-and-security

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. IDASH Security and HIPAA. For more information regarding the HIPAA Security Rule, visit U.S. Department of Health and Human Services. Per the Department of Health and Human Services,. The HITECH Act created chang...

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iDASH | integrating Data for Analysis, Anonymization, and SHaring

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. Natural Language Processing (NLP) Ecosystem. A suite of installed NLP tools. PhenDisco - a new search tool for dbGaP. Learn About NLP Systems. Tutorials, Lectures, and Webinars. Access Clinical Text Data.

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iDASH | integrating Data for Analysis, Anonymization, and SHaring

Skip to main content. PHI and PII Definition and Data Elements. CYCORE: Cyberinfrastructure for Cancer Comparative Effectiveness Research. Privacy-Preserved Sharing and Analysis of Human Genomic Data. SHARE: Statistical Health Information Release with Differential Privacy. NLP and Data Modeling. Learn more about our driving biomedical and bioinformatics projects. Host and access data in a secure and privacy-preserving environment. Advance your research and push your boundaries.

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