This is an accompanying webpage to the paper:. Extracting a low-dimensional description of. Multiple gene expression datasets reveals a potential driver for tumor-associated stroma in ovarian cancer. Safiye Celik, Benjamin A Logsdon, Stephanie Battle, Charles W Drescher, Mara Rendi, R David Hawkins, Su-In Lee. Followed by experimental validation.
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INSPIRE | inspire.cs.washington.edu Reviews
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This is an accompanying webpage to the paper:. Extracting a low-dimensional description of. Multiple gene expression datasets reveals a potential driver for tumor-associated stroma in ovarian cancer. Safiye Celik, Benjamin A Logsdon, Stephanie Battle, Charles W Drescher, Mara Rendi, R David Hawkins, Su-In Lee. Followed by experimental validation.
inspire.cs.washington.edu
INSPIRE
http://inspire.cs.washington.edu/home
This is an accompanying webpage to the paper:. Extracting a low-dimensional description of. Multiple gene expression datasets reveals a potential driver for tumor-associated stroma in ovarian cancer. Safiye Celik, Benjamin A Logsdon, Stephanie Battle, Charles W Drescher, Mara Rendi, R David Hawkins, Su-In Lee. Followed by experimental validation.
Methods - INSPIRE
http://inspire.cs.washington.edu/more
An R implementation of the INSPIRE algorithm is freely available as a CRAN package:. Https:/ cran.r-project.org/web/packages/INSPIRE/index.html. You can install INSPIRE package using the command install.packages('INSPIRE'). Below is an example of how to call INSPIRE in R after installing the package. Mcnt = 90 #module size. Lambda = .1 #penalty parameter to induce sparsity. Download two real gene expression datasets in the package. The rows represent genes and columns represent samples in those datasets.
Data - INSPIRE
http://inspire.cs.washington.edu/data
TCGA tumor residual after surgery.
Recent site activity - INSPIRE
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Dec 8, 2016, 5:55 PM. Safiye Celik edited Methods. Dec 8, 2016, 5:54 PM. Safiye Celik edited Methods. Dec 8, 2016, 5:53 PM. Safiye Celik deleted attachment INSPIRE R.so. Dec 8, 2016, 5:53 PM. Safiye Celik deleted attachment example dataset2.csv. Dec 8, 2016, 5:53 PM. Safiye Celik deleted attachment example dataset1.csv. Dec 8, 2016, 5:53 PM. Safiye Celik edited Methods. Dec 8, 2016, 5:53 PM. Safiye Celik deleted attachment INSPIRE.R. Nov 10, 2016, 1:45 PM. Safiye Celik edited Home. Sep 15, 2016, 9:08 PM.
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Software - Lee Lab
http://suinlee.cs.washington.edu/software
536 Paul Allen Center. Suinlee AT uw.edu. Research Group of Prof. Su-In Lee. CSE 527 Computational Biology. GENOME 560 Statistics for Genome Scientists. Learning Sparse Gaussian Graphical Models with Overlapping Blocks. Neural Information Processing Systems (NIPS) 2016. Afiye Celik, Benjamin A. Logsdon, Stephanie Battle, Charles W. Drescher, Mara H. Rendi, David R. Hawkins, and. 2016 Jun 10;8(1):66. Maxim Grechkin, Benjamin A. Logsdon, Andrew J. Gentles, and. Identifying Network Perturbation in Cancer.
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INSPIRE
This is an accompanying webpage to the paper:. Extracting a low-dimensional description of. Multiple gene expression datasets reveals a potential driver for tumor-associated stroma in ovarian cancer. Safiye Celik, Benjamin A Logsdon, Stephanie Battle, Charles W Drescher, Mara Rendi, R David Hawkins, Su-In Lee. Followed by experimental validation.
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INSPIRE CZ, s.r.o. Postavíme vám fungující byznys na internetu. Svěřte nám své představy, touhy, plány a cíle. A sledujte, jak se postupně začínají plnit. Zanalyzujeme. Vymyslíme. Rozvrhneme. Nakreslíme. Nakódujeme. Vyvineme. Rozjedeme. Zviditelníme. Zkontrolujeme. Pomůžeme. Propagace, PR, emailing. Nastup do inspirativního týmu. Ukaž nám, jak krotíš kód. Veď projekty pro miliony zákazníků. Navrhuj revoluční weby. Staň se tvůrcem. Dělej, co umíš nejlépe. Otevřenost, upřímnost a komunikace. V kampaních ji...
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September 21, 2013. April 7, 2015. INSPIRE Institute for Strategic and Public Policy Research adalah lini usaha Damarsewu Group yang berkonsentrasi pada riset dan konsultansi strategi, kebijakan publik, dan ekonomi politik. Institute for Strategic and Public Policy. Survei: Mayoritas Rakyat Indonesia Anggap SBY-Boediono Gagal Membangun Ekonomi. September 3, 2013. December 4, 2013. Minggu, 24 April 2011. Kehidupan Urbanis Indonesia Memburuk. September 3, 2013. December 4, 2013. 8211; Kondisi ekonomi masya...
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INSPIRE: Integrated NanoScience Platform for Ireland - at DCU. Integrated NanoScience Platform for Ireland - is a. National collaborative research project involving 6 Irish Universities, and Dublin and Cork Institutes of Technology. The research programme is funded by the Higher Education Authority through the Programme for Research in Third Level Institute (PRTLI 4 and PRTLI5). Key programme aims include:. Development of shared national nanoscience graduate programmes. The development of optical systems...
