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IREFINDEX.ORG

irefindex

IRefIndex provides an index of protein interactions available in a number of primary interaction databases including BIND, BioGRID, CORUM, DIP, HPRD, InnateDB, IntAct, MatrixDB, MINT, MPact, MPIDB and MPPI. Download version 15.0 of the iRefIndex in PSI-MITAB tab-delimited format. More ways to access iRefIndex, documentation, release notes, citations and references, technical details, mailing list, contact and license. More about Donaldson Research. Ian Donaldson email me.

http://www.irefindex.org/

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Ian Donaldson

Malmy●●●●●n 23B

O●o , Oslo, 0198

NO

47.9●●●●5149
ia●●●●●●@gmail.com

View this contact

Ian Donaldson

Malmy●●●●●n 23B

O●o , Oslo, 0198

NO

47.9●●●●5149
ia●●●●●●@gmail.com

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IRefIndex provides an index of protein interactions available in a number of primary interaction databases including BIND, BioGRID, CORUM, DIP, HPRD, InnateDB, IntAct, MatrixDB, MINT, MPact, MPIDB and MPPI. Download version 15.0 of the iRefIndex in PSI-MITAB tab-delimited format. More ways to access iRefIndex, documentation, release notes, citations and references, technical details, mailing list, contact and license. More about Donaldson Research. Ian Donaldson email me.
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irefindex | irefindex.org Reviews

https://irefindex.org

IRefIndex provides an index of protein interactions available in a number of primary interaction databases including BIND, BioGRID, CORUM, DIP, HPRD, InnateDB, IntAct, MatrixDB, MINT, MPact, MPIDB and MPPI. Download version 15.0 of the iRefIndex in PSI-MITAB tab-delimited format. More ways to access iRefIndex, documentation, release notes, citations and references, technical details, mailing list, contact and license. More about Donaldson Research. Ian Donaldson email me.

LINKS TO THIS WEBSITE

donaldsonresearch.com donaldsonresearch.com

Past experience | Donaldson Research

http://donaldsonresearch.com/past-experience

Bioinformatics consulting and research. During 2005 to 2013, I ran my own research group at the University of Oslo. This work focused mainly on integration of protein interaction data from multiple primary databases and towards the end, we used these data to investigate their use in identifying drug-targets and genes involved in multi-locus diseases. The highlight of this work was a series of papers on the iRefIndex. And a Cytoscape plugin for visualization of protein interaction data. My post-doctoral w...

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Get help and find out more - FunCoup

http://funcoup.sbc.su.se/help

The name FunCoup [fən kəp] stands for fun. Ling FunCoup is a framework to infer genome-wide functional couplings in 11 model organisms. Functional coupling, or functional association, is an unspecific form of association that encompasses direct physical interaction but also more general types of direct or indirect interaction like regulatory interaction or participation the same process or pathway. Evidence is transfered across species using orthology assignments from InParanoid. Are combined, where inte...

funcoup.sbc.su.se funcoup.sbc.su.se

Data sources and statistics of the latest release - FunCoup

http://funcoup.sbc.su.se/statistics

Sizes of the summary networks with the strongest links from each class for different ranges of final Bayesian scores (FBS). The fist interval corresponds roughly to an confidence score interval of 0.1 to 0.25 the second interval to 0.25 to 0.75 and the last interval to 0.75 to 1. Number of genes (nodes) in the summary networks of the different species. Phylogenetic profile similarity (PHP). Shared transcription factor binding (TFB). Co-miRNA regulation by shared miRNA targeting (MIR). Li and White (2003).

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Databases - Bioadvertisement.com

http://bioadvertisement.com/index.php/Databases

Primary nucleotide sequence databases. International Nucleotide Sequence Database. INSD) consists of the following databases. DNA Data Bank of Japan. National Institute of Genetics. National Center for Biotechnology Information. The three databases, DDBJ (Japan), GenBank (USA) and European Nucleotide Archive (Europe), are repositories for nucleotide. Vlaams Instituut voor Biotechnologie. A knowledge discovery service based on the integration of more than 20 heterogeneous databases. Containing four of the...

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irefindex.org irefindex.org

irefindex

IRefIndex provides an index of protein interactions available in a number of primary interaction databases including BIND, BioGRID, CORUM, DIP, HPRD, InnateDB, IntAct, MatrixDB, MINT, MPact, MPIDB and MPPI. Download version 15.0 of the iRefIndex in PSI-MITAB tab-delimited format. More ways to access iRefIndex, documentation, release notes, citations and references, technical details, mailing list, contact and license. More about Donaldson Research. Ian Donaldson email me.

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