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Hongkai’s Computational biology Group. Welcome to Hongkai Ji’s Research Group. We are interested in developing statistical and computational methods for analyzing big and complex data, particularly high-throughput genomic data. We apply these tools to study gene regulatory programs in development and diseases. Our new paper on using gene expression data to predict regulatory element activities is accepted and will appear in Nature Communications. Check out. Check out our new software. A database of publi...

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Hongkai’s Computational biology Group. Welcome to Hongkai Ji’s Research Group. We are interested in developing statistical and computational methods for analyzing big and complex data, particularly high-throughput genomic data. We apply these tools to study gene regulatory programs in development and diseases. Our new paper on using gene expression data to predict regulatory element activities is accepted and will appear in Nature Communications. Check out. Check out our new software. A database of publi...

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Home | jilab.biostat.jhsph.edu Reviews

https://jilab.biostat.jhsph.edu

Hongkai’s Computational biology Group. Welcome to Hongkai Ji’s Research Group. We are interested in developing statistical and computational methods for analyzing big and complex data, particularly high-throughput genomic data. We apply these tools to study gene regulatory programs in development and diseases. Our new paper on using gene expression data to predict regulatory element activities is accepted and will appear in Nature Communications. Check out. Check out our new software. A database of publi...

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hmChIP

http://jilab.biostat.jhsph.edu/database/cgi-bin/hmChIP.pl

HmChIP was created by the Johns Hopkins School of Public Health Department of Biostatistics. TF or DNA-binding proteins. Cell or Tissue Type. Overlap With Regions Below. Retrieve Data from Selected Samples. Query available experiments and samples. Choose "species", "platform type", "GSE or Lab" and "ChIP type". Provide protein names (e.g., Sox17) and cell or tissue types (e.g., stem cell). If no key words are provided, all experiments in the database will be returned. Provide an email address. If no ...

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TileMap

http://jilab.biostat.jhsph.edu/software/tilemap/index.htm

What’s New (Oct 1, 2007):. 1) TileMap is upgraded to TileMap Version 2 (tilemapv2). 2) The new version is supported as part of. This page will continue to be active to support TileMap version 1, but TileMap v2 will be supported through CisGenome website instead of here. 3) We have now developed a Graphic User Interface and a CisGenome Browser which allow you to visualize your data in the context of gene structures. Please go to. What’s New (Mar 15, 2006):. What’s New (Nov 10, 2005):. 2) TileMap can be us...

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jilab.biostat.jhsph.edu

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Hongkai’s Computational biology Group. Welcome to Hongkai Ji’s Research Group. We are interested in developing statistical and computational methods for analyzing big and complex data, particularly high-throughput genomic data. We apply these tools to study gene regulatory programs in development and diseases. Our new paper on using gene expression data to predict regulatory element activities is accepted and will appear in Nature Communications. Check out. Check out our new software. A database of publi...

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