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Jörg Steinkamps Blog – Mainly things about R, Linux and vegetation modelingMainly things about R, Linux and vegetation modeling
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Mainly things about R, Linux and vegetation modeling
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Jörg Steinkamps Blog – Mainly things about R, Linux and vegetation modeling | joergsteinkamp.wordpress.com Reviews
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Mainly things about R, Linux and vegetation modeling
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Wasp variety in our community garden – Jörg Steinkamps Blog
https://joergsteinkamp.wordpress.com/2016/01/22/wasp-variety-in-our-community-garden
Mainly things about R, Linux and vegetation modeling. Wasp variety in our community garden. January 22, 2016. May 20, 2016. Last summer I realized that there is quiet a variety of wasps is our community garden. And I know that not only bees are pollenizer, but I was not aware of wasps doing the same job. I took several pictures of them, of which I now publish the nicest here. UPDATED SPECIES NAMES (20.5.2016) Thanks to Alexandra Stevens (BUND Mainz). Who contacted an expert. Mapping traceroutes with Perl.
Broken axis with ggplot2 – Jörg Steinkamps Blog
https://joergsteinkamp.wordpress.com/2016/01/22/broken-axis-with-ggplot2
Mainly things about R, Linux and vegetation modeling. Broken axis with ggplot2. January 22, 2016. January 22, 2016. For visualizing my data I use R. And the library ggplot2. And just lately I made some sensitivity simulations with out dynamic global vegetation model (DGVM) LPJ-GUESS. The data used in this example can be downloaded from my Dropbox. Baseplot - function(data) {. P - ggplot(data, aes(x=value, y=name, col=sens). P - p theme bw(). P - p theme(legend.position="bottom"). P - p xlab(" ) ylab(" ).
joergsteinkamp – Jörg Steinkamps Blog
https://joergsteinkamp.wordpress.com/author/joergsteinkamp
Mainly things about R, Linux and vegetation modeling. I am a Post-Doc at the Biodiversity and Climate Research Centre (BiK-F) in Frankfurt am Main/Germany. Currently I apply the dynamic global vegetation model LPJ-GUESS to model impacts of climate change, potential distribution of specific plant species, water usage, biome shift, and so on. My focus is on recent drought-induced mortality and carbon storage in forests and savannas. February 3, 2017. February 3, 2017. I’ve build an R package. July 14, 2016.
Flying bumblebees – Jörg Steinkamps Blog
https://joergsteinkamp.wordpress.com/2016/04/18/flying-bumblebees
Mainly things about R, Linux and vegetation modeling. April 18, 2016. April 18, 2016. Spring arrived and pollinators started their work. In 2013 I took a picture of a bumblebee, just leaving a flower and flying towards me by chance. If it was a sharp picture it would have been really great picture. Since then the same happened several times and in the following I show those photos, which are at least so (un-)sharp, that the insect can be recognized. Bees in the dirt. Leave a Reply Cancel reply.
Accelerate NetCDF-4 read access – Jörg Steinkamps Blog
https://joergsteinkamp.wordpress.com/2016/07/14/accelerate-netcdf-4-read-access
Mainly things about R, Linux and vegetation modeling. Accelerate NetCDF-4 read access. July 14, 2016. July 15, 2016. For simulating the (global) terrestrial biosphere I need time series of climate data, which is mostly provided in a 3-dimesional NetCDF. The vegetation model I work with ( LPJ-GUESS. Commands to reorganize NetCDF-3 files. It first removes the unlimited time dimension and then permutes the dimensions, so that the data is ordered along the time axis. Next one needs at least 2*filesize RAM!
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conservationecology.wordpress.com
Curlew is now on Twitter | Conservation Ecology
https://conservationecology.wordpress.com/2014/08/07/curlew-is-now-on-twitter-2
Conservation and Ecology and everything between. QGIS plugins and scripts. August 7, 2014. Curlew is now on Twitter. Will try to set it up properly later at home, tweet some news, follow some people. Social media doesn’t count as worktime (yet). What Irony that this is actually my 5oth blog-post since I started this blog. Share on Facebook (Opens in new window). Click to share on LinkedIn (Opens in new window). Click to share on Twitter (Opens in new window). Click to share on Google (Opens in new window).
conservationecology.wordpress.com
BES-TEG 2014 Flyer | Conservation Ecology
https://conservationecology.wordpress.com/2014/07/08/it-is-conference-summer-bes-teg-in-york-2014/1-flyer
Conservation and Ecology and everything between. QGIS plugins and scripts. PhD researcher at the University of Sussex. Interested in nature conservation, ecology and biodiversity as well as statistics, GIS and 'big data'. View all posts by Martin Jung ». Laquo; Previous post. Leave a Reply Cancel reply. Enter your comment here. Fill in your details below or click an icon to log in:. Address never made public). You are commenting using your WordPress.com account. ( Log Out. Notify me of new posts via email.
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It is conference-summer – BES-TEG in YORK 2014 | Conservation Ecology
https://conservationecology.wordpress.com/2014/07/08/it-is-conference-summer-bes-teg-in-york-2014
Conservation and Ecology and everything between. QGIS plugins and scripts. July 8, 2014. It is conference-summer – BES-TEG in YORK 2014. See the attached Documents ( BES-TEG 2014 Flyer. BES TEG Key speakers. For more information. I will be there as well… . Please find attached the flyer and conference document for detailed information. An event website has been set up for registration. Http:/ www.eventbrite.co.uk/o/british-ecological-society-tropical-ecology-group-bes-teg-6217007537. Laquo; Previous post.
conservationecology.wordpress.com
Gallery | Conservation Ecology
https://conservationecology.wordpress.com/gallery
Conservation and Ecology and everything between. QGIS plugins and scripts. Some pictures i made hosted on flickr.com. Share on Facebook (Opens in new window). Click to share on LinkedIn (Opens in new window). Click to share on Twitter (Opens in new window). Click to share on Google (Opens in new window). Click to print (Opens in new window). Click to share on Flattr (Opens in new window). Leave a Reply Cancel reply. Enter your comment here. Fill in your details below or click an icon to log in:. Supporti...
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Neutral Landscape model generation with QGIS | Conservation Ecology
https://conservationecology.wordpress.com/2015/01/16/neutral-landscape-model-generation-with-qgis
Conservation and Ecology and everything between. QGIS plugins and scripts. January 16, 2015. Neutral Landscape model generation with QGIS. I recently found this new article in Methods in Ecology and Evolution. Stating that existing NLMS are often misused and better null-models are needed for specific hypothesis, such as a species perception of landscape structures. Nevertheless NLMs are still actively used and new papers published with it. 196 version, but only if you have NLMpy installed and it is avail...
conservationecology.wordpress.com
Assessing habitat specialization using IUCN data | Conservation Ecology
https://conservationecology.wordpress.com/2015/03/29/assesing-habitat-specialization-using-iucn-data
Conservation and Ecology and everything between. QGIS plugins and scripts. March 29, 2015. Assessing habitat specialization using IUCN data. Since quite some time ecological models have tried to incorporate both continuous and discrete characteristics of species into their models. Newbold et al. (2013). But how to acquire such data on habitat specialization? Ether you assemble your own exhaustive trait database or you query information from some of the openly available data sources. One could for ins...
conservationecology.wordpress.com
Scripts | Conservation Ecology
https://conservationecology.wordpress.com/qgis-plugins-and-scripts/scripts
Conservation and Ecology and everything between. QGIS plugins and scripts. Python Scripts for QGIS. Place under “. R Scripts for QGIS. Place under “. With file extension .rsx. Displays a basic levelplot of an input raster using rasterVis # [Own Scripts] = group # layer = raster # showplots library(rasterVis) myPal - terrain.colors(20) levelplot(layer,col.regions=myPal,contour=T). Require(ggmap) {print(ggmap not installed. Will install it now);install.packages(ggmap, dependencies = TRUE)} library(...New p...
conservationecology.wordpress.com
QGIS plugins and scripts | Conservation Ecology
https://conservationecology.wordpress.com/qgis-plugins-and-scripts
Conservation and Ecology and everything between. QGIS plugins and scripts. QGIS plugins and scripts. Click the Links on the dropdown menu to access all the QGIS plugins and functions that i have coded. Leave a Reply Cancel reply. Enter your comment here. Fill in your details below or click an icon to log in:. Address never made public). You are commenting using your WordPress.com account. ( Log Out. You are commenting using your Twitter account. ( Log Out. Notify me of new comments via email. Mainly thin...
conservationecology.wordpress.com
Resources | Conservation Ecology
https://conservationecology.wordpress.com/resources
Conservation and Ecology and everything between. QGIS plugins and scripts. Finding free data can be quite hard, but here you’ll find useful resources about various topics. Feel free to suggest more good projects and links to me. New paper: A first global assessment of remaining biodiversity intactness. New publication: LecoS now with own reference. Get credit for your work! To all editors, reviewers and authors: time to move on regarding land sparing. Landscape Ecology 2.0. Amy Whitehead's Research.
conservationecology.wordpress.com
Bulk downloading and analysing MODIS data in R | Conservation Ecology
https://conservationecology.wordpress.com/2014/08/11/bulk-downloading-and-analysing-modis-data-in-r
Conservation and Ecology and everything between. QGIS plugins and scripts. August 11, 2014. Bulk downloading and analysing MODIS data in R. Today we are gonna work with bulk downloaded data from MODIS. Different ways how to acquire and calculate the mean EVI for a given Region and time-period. For this we are using the MOD13Q1. Product. We focus on the area a little bit south of Mount Kilimanjaro and the temporal span around May 2014. The first handy R-package we gonna use is MODISTools. If you want to g...
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Jörg Steinkamps Blog – Mainly things about R, Linux and vegetation modeling
Mainly things about R, Linux and vegetation modeling. Accelerate NetCDF-4 read access. July 14, 2016. July 15, 2016. For simulating the (global) terrestrial biosphere I need time series of climate data, which is mostly provided in a 3-dimesional NetCDF. Continue reading “Accelerate NetCDF-4 read access”. My “twitter bubble” R analysis. April 20, 2016. April 20, 2016. I started using twitter on the INTECOL. Continue reading “My “twitter bubble” R analysis”. April 18, 2016. April 18, 2016. April 15, 2016.
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