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L3 Bioinformatics Limited

The Future of Computing Technologies for Bioinformatics. Economic, fast and accurate genome analysis software solution. BALSA/ELSA allows organisations to analyse data quickly without additional investments in large computing systems. Takes only 4.08 hours to process a 50-fold whole genome sequence (WGS) sample, or 10 minutes for a 200-fold whole exome sequence (WES) sample. Outputs variants in VCF, alignment results in SAM/BAM format and stores a SNAPSHOT for efficient storage and indexing. It is a secu...

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L3 Bioinformatics Limited

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L3 Bioinformatics Limited

Patrick Yee

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Hon●●●ong , Hong Kong, N/A

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852.●●●●0981

pa●●●●●●●●●@gmail.com

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L3 Bioinformatics Limited

Patrick Yee

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Hon●●●ong , Hong Kong, N/A

Hong Kong

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pa●●●●●●●●●@gmail.com

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The Future of Computing Technologies for Bioinformatics. Economic, fast and accurate genome analysis software solution. BALSA/ELSA allows organisations to analyse data quickly without additional investments in large computing systems. Takes only 4.08 hours to process a 50-fold whole genome sequence (WGS) sample, or 10 minutes for a 200-fold whole exome sequence (WES) sample. Outputs variants in VCF, alignment results in SAM/BAM format and stores a SNAPSHOT for efficient storage and indexing. It is a secu...

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L3 Bioinformatics Limited | l3-bioinfo.com Reviews

https://l3-bioinfo.com

The Future of Computing Technologies for Bioinformatics. Economic, fast and accurate genome analysis software solution. BALSA/ELSA allows organisations to analyse data quickly without additional investments in large computing systems. Takes only 4.08 hours to process a 50-fold whole genome sequence (WGS) sample, or 10 minutes for a 200-fold whole exome sequence (WES) sample. Outputs variants in VCF, alignment results in SAM/BAM format and stores a SNAPSHOT for efficient storage and indexing. It is a secu...

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l3sdk.l3-bioinfo.com

Welcome to L3 BGI-Online SDK’s documentation! — L3 BGI Online SDK beta documentation

L3 BGI Online SDK. Example: 3K Rice Genome Project. Example: BWA GATK (Alpha, Obseleted). Example: TopHat (Alpha, Obseleted). Welcome to L3 BGI-Online SDK’s documentation! Welcome to L3 BGI-Online SDK’s documentation! The L3 BGI Online SDK is a Python library and a command-line tool that makes it easy to port bioinformatics pipelines to BGI Online cloud platform. The L3 BGI Online SDK was developed based on the open-source software SBGSDK. Whose tutorial can be found here. Initializing a new tool project.

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l3-bioinfo.com

1

BALSA/ELSA

http://www.l3-bioinfo.com/products/balsa_elsa.html

FASTA to Variants: WGS in 4 hours on a node. BALSA / ELSA is an economic, fast and accurate solution for the secondary analysis of next generation sequencing data. Request 14-day Trial / Quotation. Your message has been received and we will get back to you soon. Something went wrong while submitting the form :(. WGS alignment and variant calling. WES alignment and variant calling. Variant outputs in VCF format. Alignment outputs in BAM or SNAPSHOT formats. 12 cores, 2.0GHz. 8 cores, 3.5GHz. 6 cores 1 GPU.

2

Helicube

http://www.l3-bioinfo.com/products/Helicube/index.html

Makes NGS Analysis Simple and Fast. Request 21-day Trial / Quotation. Your message has been received and we will get back to you soon. Something went wrong while submitting the form :(. Fast and accurate genome analysis:. From raw reads to variants, BALSA takes a few hours for WGS, and ten plus minutes for WES. Pre-installed pipelines include BALSA, BWA GATK, TOPHAT, STAR and Cufflinks. Extendable with Helicube Python SDK. Is a clinical decision-support system that interprets genome variants (input with ...

3

L3 Bioinformatics Limited

http://www.l3-bioinfo.com/index.html

The Future of Computing Technologies for Bioinformatics. Economic, fast and accurate genome analysis software solution. BALSA/ELSA allows organisations to analyse data quickly without additional investments in large computing systems. Takes only 4.08 hours to process a 50-fold whole genome sequence (WGS) sample, or 10 minutes for a 200-fold whole exome sequence (WES) sample. Outputs variants in VCF, alignment results in SAM/BAM format and stores a SNAPSHOT for efficient storage and indexing. It is a secu...

4

About

http://www.l3-bioinfo.com/about.html

The L3 Bioinformatics team is expert in algorithm research and software development for NGS analysis including alignment, variant detection, assembly and metagenomics and owns a number of state-of-the-art software in such areas. L3 Bioinformatics is also proud of its experience in customizing its software for clinical usage, as well as in developing platform software for large scale analysis. Prof TAK-WAH LAM, PhD. Co-founder, Board Chair. Prof DAVID W.L. CHEUNG, PhD. Co-founder, Executive Director.

5

Careers

http://www.l3-bioinfo.com/careers.html

L3 is a young company where scientists, engineers, professors, and industrial partners work together to invent and develop the future of computing technologies for bioinformatics. That said, it is never easy to develop state-of-the-art technology which advances genomics analysis. And perhaps the hardest of all, we need a team who can work together and change the world. To participate in research projects on developing advanced computing technologies for bioinformatics. Fresh graduates welcome for junior ...

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bgionline.com

BGI Online

https://www.bgionline.com/case02.html

Use Cases Diagnostic Test Providers. Feeding data from the sequencing machines to analysis pipelines, and then delivering the results to clients can take months with traditional infrastructure. BGI Online automates these tasks through integration with your current Laboratory Information Management Systems (LIMS) and decreases the time spent on logistics. You can now focus on bringing more value to your customers while increasing your own revenues. Security every step of the way. Read security white paper.

bgionline.com

BGI Online

https://www.bgionline.com/pipeline.html

WES Human Whole Exome Sequencing Analysis Pipeline (BGI Refined). WGS Human Whole Genome Sequencing Analysis Pipeline (BGI Refined). RNA-seq : RNA-seq Analysis Pipeline (BGI Refined). Whole Genome Analysis 30x - BWA GATK. Whole Exome Analysis - BWA GATK 2.3.9-Lite (with Metrics) (General). Whole Genome Analysis - BWA GATK 2.3.9-Lite (with Metrics) (General). RNA-Seq Differential Expression - Cuffdiff (with Visualization) (General). 50x coverage WGS (150GB): 4 hours. 200x coverage WES (10G): 15 mins.

bgionline.com

BGI Online

https://www.bgionline.com/index.html

Analyse, store and share. Your genomics data securely. BGI Online helps you on genome sequencing and analysis projects, while eliminating software setup and file transfer logistics. It is a secure cloud platform for bioinformaticians to advance life-saving research. Access the world’s largest. Repository of genomic data. Use our best practices or create your own pipeline. Share your findings to clients and peers. Visualise your results using database.bio. Who can use BGI Online? 8226; Tool developers.

bgionline.com

BGI Online

https://www.bgionline.com/case03.html

Use Cases Biopharmaceutical Company. Analysis performed by research and development teams is valuable proprietary knowledge. But managing such information across large teams is difficult. With BGI Online’s ability to customise project permissions by granting specific access to individuals, team members can now focus on discovering the next medical breakthrough. Integrate seamlessly and increase your revenues. Security every step of the way. Read security white paper. Easily share your results. Main Build...

bgionline.com

BGI Online

https://www.bgionline.com/case01.html

Use Cases Sequencing Providers. Data generated by sequencing genomes take up petabytes of storage space. The cost of infrastructure upgrade and storage capacity limits the range of services that can be provided. With BGI Online’s cloud computing, you can expand your service portfolio without further investments and focus on delivering value to clients. Expand service offerings without more investment. Security every step of the way. Read security white paper. Easily share your results. Main Building, Bei...

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L3 Bioinformatics Limited

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