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February | 2015 | Do The Stats
https://dothestats.wordpress.com/2015/02
A Few New Manuscripts. February 19, 2015. Several manuscripts I worked on in the past few years have recently made their way though the publication process. Center-Level Variation in the Development of Delayed Graft Function After Deceased Donor Kidney Transplantation. Trends in Kidney Transplant Outcomes in Older Adults. Loss of Pediatric Kidney Grafts During the High Risk Age Window : Insights From Pediatric Liver and Simultaneous Liver Kidney Recipients. A Few New Manuscripts. Stats With Cats Blog.
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Do The Stats | pragmatic statistics blog | Page 2
https://dothestats.wordpress.com/page/2
June 30, 2013. Today is my last day as a Research Associate at Johns Hopkins School of Medicine. My next job will be at a statistical consulting company and I’m excited to get started. I’m not sure how much time or energy I’ll have for the blog, but hopefully I’ll still be able to post every once and a while. Cheers! Save space by quickly compressing Stata files. May 1, 2013. Stata has a nice function called. Log using datasets.log, text replace ls *.dta log close. Forvalues i=1/150 { preserve local name...
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A small neuroimage interactive plotter | A HopStat and Jump Away
https://hopstat.wordpress.com/2015/04/09/a-small-neuroimage-interactive-plotter
A HopStat and Jump Away. Trying to at least Doggie Paddle through the Sea of Data, Contributor to http:/ bmorebiostat.com. Why are you here. A small neuroimage interactive plotter. April 9, 2015. From RStudio allows you to create simple Tcl/Tk operators for interactive visualization. I will use it for a simple slider to view different slices of an image. I'm calling the. Is accessible after loading. You can download a test NIfTI image here. Here I will read in the template image:. Function would be used:.
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#rstats Make arrays into vectors before running table | A HopStat and Jump Away
https://hopstat.wordpress.com/2015/07/30/rstats-make-arrays-into-vectors-before-running-table
A HopStat and Jump Away. Trying to at least Doggie Paddle through the Sea of Data, Contributor to http:/ bmorebiostat.com. Why are you here. Rstats Make arrays into vectors before running table. July 30, 2015. I tried to table the values of the image. The table took a long time to compute. I thought this was due to the added information about a medical image, but I found that the same sluggishness happened when coercing the. Quick, illustrative simulation. But, if I coerced the data to a. And the vector (.
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The Unofficial ENAR 2015 Itinerary Maker | A HopStat and Jump Away
https://hopstat.wordpress.com/2015/03/10/the-unofficial-enar-2015-itinerary-maker
A HopStat and Jump Away. Trying to at least Doggie Paddle through the Sea of Data, Contributor to http:/ bmorebiostat.com. Why are you here. The Unofficial ENAR 2015 Itinerary Maker. March 10, 2015. It’s almost ENAR 2015! Is out with all the sessions. The last conference I went to, the International Stroke Conference. Had a program planner. Hosted by abstracts online. John Muschelli’s ENAR 2015 Itinerary Maker. Functions and How to Use. Here is an example screen shot of the shiny app. Button next to each...
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December | 2014 | A HopStat and Jump Away
https://hopstat.wordpress.com/2014/12
A HopStat and Jump Away. Trying to at least Doggie Paddle through the Sea of Data, Contributor to http:/ bmorebiostat.com. Why are you here. Monthly Archives: December 2014. Adding Cost Functions to ROCR performance objects. December 22, 2014. In my last post. I gave an introduction of the ROCR package and how to use it for ROC analysis. In the ROCR reference manual. Had “patched” the performance code to use a new performance measure. I wanted to add an overlap measure known as the Dice coefficient.
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White Matter Segmentation in R | A HopStat and Jump Away
https://hopstat.wordpress.com/2015/04/07/white-matter-segmentation-in-r-5
A HopStat and Jump Away. Trying to at least Doggie Paddle through the Sea of Data, Contributor to http:/ bmorebiostat.com. Why are you here. White Matter Segmentation in R. April 7, 2015. Goals and Overall Approach. We will use multiple packages and pieces of software for white matter (and gray matter/cerebro spinal fluid (CSF) segmentation. The overall approach will be, with the required packages in parentheses:. N4 Inhomogeneity Bias-Field Correction. Brain extraction using BET. And additional tools (.
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Line plots of longitudinal summary data in R using ggplot2 | A HopStat and Jump Away
https://hopstat.wordpress.com/2015/07/09/line-plots-of-longitudinal-summary-data-in-r-using-ggplot2-2
A HopStat and Jump Away. Trying to at least Doggie Paddle through the Sea of Data, Contributor to http:/ bmorebiostat.com. Why are you here. Line plots of longitudinal summary data in R using ggplot2. July 9, 2015. I recently had an email for a colleague asking me to make a figure like this in. As I know more about how to do things in. I chose to use that package (if it wasn't obvious from the plot or other posts). To illustrate this, I will create some sample dataset:. If you want to plot all 3. Variabl...
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August | 2014 | A HopStat and Jump Away
https://hopstat.wordpress.com/2014/08
A HopStat and Jump Away. Trying to at least Doggie Paddle through the Sea of Data, Contributor to http:/ bmorebiostat.com. Why are you here. Monthly Archives: August 2014. Statisticians in Neuroimaging Need to Learn Preprocessing. August 27, 2014. I have worked in neuroimaging for the past 4-5 years. I work on CT scans for stroke patients, but have also worked on fMRI and some structural image analyses. One important thing I have learned: (pre? Processing means a lot. Take a note from Bioinformatics.
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January | 2015 | A HopStat and Jump Away
https://hopstat.wordpress.com/2015/01
A HopStat and Jump Away. Trying to at least Doggie Paddle through the Sea of Data, Contributor to http:/ bmorebiostat.com. Why are you here. Monthly Archives: January 2015. The average Stripe employee! January 3, 2015. Recently, my colleague and fellow blogger Alyssa Frazee. Accepted a job at Stripe. All of us at JHU Biostat. Are happy for her, yet sad to see her go. While perusing Stripe’s website, I found the About page. In order to get the images, I had to scrape the about page for links. Cafile - sys...
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