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lumi **

Lumi is an ongoing project for Illumina microarray data analysis, including the design of a software package in R/Bioconductor and the discussion of microarray experiment design. An open source project at the Bioinformatics Core of the Robert H. Lurie Comprehensive Cancer Center, Northwestern University. No Panacea (yet): NGS for Small RNA. Here is the link to the Nature Methods (July 2009) paper. Http:/ www.nature.com/nmeth/journal/v6/n7/full/nmeth0709-474.html. Posted by Chicago, IL, USA @ 12:31 PM.

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lumi ** | luminato.blogspot.com Reviews

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Lumi is an ongoing project for Illumina microarray data analysis, including the design of a software package in R/Bioconductor and the discussion of microarray experiment design. An open source project at the Bioinformatics Core of the Robert H. Lurie Comprehensive Cancer Center, Northwestern University. No Panacea (yet): NGS for Small RNA. Here is the link to the Nature Methods (July 2009) paper. Http:/ www.nature.com/nmeth/journal/v6/n7/full/nmeth0709-474.html. Posted by Chicago, IL, USA @ 12:31 PM.

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lumi ** | luminato.blogspot.com Reviews

https://luminato.blogspot.com

Lumi is an ongoing project for Illumina microarray data analysis, including the design of a software package in R/Bioconductor and the discussion of microarray experiment design. An open source project at the Bioinformatics Core of the Robert H. Lurie Comprehensive Cancer Center, Northwestern University. No Panacea (yet): NGS for Small RNA. Here is the link to the Nature Methods (July 2009) paper. Http:/ www.nature.com/nmeth/journal/v6/n7/full/nmeth0709-474.html. Posted by Chicago, IL, USA @ 12:31 PM.

INTERNAL PAGES

luminato.blogspot.com

1

lumi **: SQLite on Mac/ Bioconductor

http://luminato.blogspot.com/2007/06/sqlite-on-mac-bioconductor.html

Lumi is an ongoing project for Illumina microarray data analysis, including the design of a software package in R/Bioconductor and the discussion of microarray experiment design. An open source project at the Bioinformatics Core of the Robert H. Lurie Comprehensive Cancer Center, Northwestern University. SQLite on Mac/ Bioconductor. As our data set growing bigger and bigger, keeping them in a flat file is no longer possible. 2) Able to handle large ( tera-tera bytes) data. With a few kinks, it works out.

2

lumi **: Adding nuID to BeadStudio Outputs

http://luminato.blogspot.com/2008/04/adding-nuid-to-beadstudio-outputs.html

Lumi is an ongoing project for Illumina microarray data analysis, including the design of a software package in R/Bioconductor and the discussion of microarray experiment design. An open source project at the Bioinformatics Core of the Robert H. Lurie Comprehensive Cancer Center, Northwestern University. Adding nuID to BeadStudio Outputs. Here is quick review from the BeadStudio Manual. Posted by Chicago, IL, USA @ 4:07 PM. Group Gene Profile, Sample Probe Profile, vs. Sam. Digging deeper into PubMed.

3

lumi **: Background Correction Methods Implemented by Illumina

http://luminato.blogspot.com/2007/10/background-correction-methods.html

Lumi is an ongoing project for Illumina microarray data analysis, including the design of a software package in R/Bioconductor and the discussion of microarray experiment design. An open source project at the Bioinformatics Core of the Robert H. Lurie Comprehensive Cancer Center, Northwestern University. Background Correction Methods Implemented by Illumina. The confusion stemmed from the two-step data processing used by Illumina:. Image processing by BeadScan. Both processes manipulate the background!

4

lumi **: No Panacea (yet): NGS for Small RNA

http://luminato.blogspot.com/2009/07/no-panacea-yet-ngs-for-small-rna.html

Lumi is an ongoing project for Illumina microarray data analysis, including the design of a software package in R/Bioconductor and the discussion of microarray experiment design. An open source project at the Bioinformatics Core of the Robert H. Lurie Comprehensive Cancer Center, Northwestern University. No Panacea (yet): NGS for Small RNA. Here is the link to the Nature Methods (July 2009) paper. Http:/ www.nature.com/nmeth/journal/v6/n7/full/nmeth0709-474.html. Posted by Chicago, IL, USA @ 12:31 PM.

5

lumi **: August 2006

http://luminato.blogspot.com/2006_08_01_archive.html

Lumi is an ongoing project for Illumina microarray data analysis, including the design of a software package in R/Bioconductor and the discussion of microarray experiment design. An open source project at the Bioinformatics Core of the Robert H. Lurie Comprehensive Cancer Center, Northwestern University. When you are talking about an "array", it can be confusing for the Illumina platform. Posted by Chicago, IL, USA @ 12:53 PM. LumiR: data I/O. read in Illumina data file. The Core Algorithm of Lumi. The c...

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lumi **

Lumi is an ongoing project for Illumina microarray data analysis, including the design of a software package in R/Bioconductor and the discussion of microarray experiment design. An open source project at the Bioinformatics Core of the Robert H. Lurie Comprehensive Cancer Center, Northwestern University. No Panacea (yet): NGS for Small RNA. Here is the link to the Nature Methods (July 2009) paper. Http:/ www.nature.com/nmeth/journal/v6/n7/full/nmeth0709-474.html. Posted by Chicago, IL, USA @ 12:31 PM.

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