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A shiny new Rmarkdown for the win! | Assembling my Network
https://assemblingnetwork.wordpress.com/2014/07/28/a-shiny-new-rmarkdown-for-the-win
The ecology is theoretical but the fun is real. Linneaus’ wormy fish – Thursday Review. Elton’s footsteps – Thursday Review →. A shiny new Rmarkdown for the win! July 28, 2014. After a few weeks without using Rmarkdown. Cut to the past few days and I have learned that Rmarkdown has gotten a great upgrade. Everything that it was good for previously, it is now even better at, and now there are so many awesome new options! Popup menu for starting a new Rmarkdown project. This entry was posted in Fun. You ar...
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Assembling my Network | The ecology is theoretical but the fun is real. | Page 2
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The ecology is theoretical but the fun is real. Newer posts →. Data data everywhere, but not a web to analyze. March 31, 2014. From personal correspondence with Jennifer Dunne. Of the PEaCE Lab. Or from author’s websites. Like Robert Ulanowicz’s. Let me first say, that it was very easy for me to find/get these datasets and I am very appreciative of the people who have made them available. But I also have to say that it is frustrating, as anyone who has taken a look at Twitter’s #otherpeoplesdata. Now I w...
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About | Assembling my Network
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The ecology is theoretical but the fun is real. I am an Ecology and Evolutionary Biology graduate student at Stony Brook University interested in the structural properties of ecological networks. Specifically, I want to know how the structure of a network, such as a food web, changes over time or as it grows/develops using a dynamic modeling approach. Leave a Reply Cancel reply. Enter your comment here. Fill in your details below or click an icon to log in:. Address never made public). I saw a poster at ...
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Network Basics | Assembling my Network
https://assemblingnetwork.wordpress.com/tutorials/network-basics
The ecology is theoretical but the fun is real. Pingback: New section on the blog Assembling my Network. Pingback: Blogroll: Assembling my Network Scientific Gems. March 24, 2014 at 1:02 PM. Thanks for posting the scripts🙂 Helped me calcuate the food web motifs! March 24, 2014 at 1:08 PM. No problem, glad you found it helpful! I would also suggest that you check out triad.census(), it uses a more efficient algorithm. March 24, 2014 at 1:20 PM. July 26, 2014 at 6:38 PM. July 28, 2014 at 12:09 PM. I think...
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Playing with data | Assembling my Network
https://assemblingnetwork.wordpress.com/2014/08/04/playing-with-data
The ecology is theoretical but the fun is real. Elton’s footsteps – Thursday Review. August 4, 2014. There is a very interesting dataset available on Mammalian Trophic Levels and Body Sizes. Troph - read.csv(paste(filepath, TrophicLevel Appendix1.csv, sep = ). The dataset is 211 rows by 12 columns (. For my purposes I did need to clean the data up a bit as in some parts a “-” was used as the null character instead of the preferable “NA”. This means that when you use. I want to use this publicly available...
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Tutorials | Assembling my Network
https://assemblingnetwork.wordpress.com/tutorials
The ecology is theoretical but the fun is real. Since my posts about the basics of networks using R and the igraph package (and some others) are my most popular posts at the moment, I decided it may be a good idea to post them all in one location (as their own page). Plus this provides me the opportunity to do more tutorial type posts and centralize them. Network basics with R and igraph. Leave a Reply Cancel reply. Enter your comment here. Fill in your details below or click an icon to log in:. I saw a ...