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Magnus Ducatus Lituaniae ProjectMagnus Ducatus Lituaniae Project - BGA analysis project for the territories of former Grand Duchy of Lithuania. Admin: Vadim Verenich Co-admin: Leon Kull
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Magnus Ducatus Lituaniae Project - BGA analysis project for the territories of former Grand Duchy of Lithuania. Admin: Vadim Verenich Co-admin: Leon Kull
http://magnusducatus.blogspot.com/
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Magnus Ducatus Lituaniae Project | magnusducatus.blogspot.com Reviews
https://magnusducatus.blogspot.com
Magnus Ducatus Lituaniae Project - BGA analysis project for the territories of former Grand Duchy of Lithuania. Admin: Vadim Verenich Co-admin: Leon Kull
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Magnus Ducatus Lituaniae Project: Geography of Ancestry: the SPA analysis of the MDLP participants
http://magnusducatus.blogspot.com/2012/09/geography-of-ancestry-spa-analysis-of.html
Magnus Ducatus Lituaniae Project. Magnus Ducatus Lituaniae Project - BGA analysis project for the territories of former Grand Duchy of Lithuania. Admin: Vadim Verenich Co-admin: Leon Kull. Friday, September 28, 2012. Geography of Ancestry: the SPA analysis of the MDLP participants. Geography of Ancestry: the SPA analysis of the MDLP participants. A team of researchers ( Wen-Yun Yang. The most important one is that. The explicit modeling of the allele frequency allows individuals to be localized on the ma...
Magnus Ducatus Lituaniae Project: Spatial Analysis of Ancestry (UPDATE)
http://magnusducatus.blogspot.com/2012/10/spatial-analysis-of-ancestry-update.html
Magnus Ducatus Lituaniae Project. Magnus Ducatus Lituaniae Project - BGA analysis project for the territories of former Grand Duchy of Lithuania. Admin: Vadim Verenich Co-admin: Leon Kull. Sunday, October 7, 2012. Spatial Analysis of Ancestry (UPDATE). One member of my project (known as "linkus") has created a map (on Google Maps) with the inferred coordinates of 'ancestral locations of the MDLP participants' being superimposed on the geographic map of Europe. Project "Magnus Ducatus Lituaniae".
Magnus Ducatus Lituaniae Project: The levels and dating of admixture in Belorusians
http://magnusducatus.blogspot.com/2012/11/the-levels-and-dating-of-admixture-in.html
Magnus Ducatus Lituaniae Project. Magnus Ducatus Lituaniae Project - BGA analysis project for the territories of former Grand Duchy of Lithuania. Admin: Vadim Verenich Co-admin: Leon Kull. Sunday, November 11, 2012. The levels and dating of admixture in Belorusians. And Belorusian samples collected by our project. Below you can glean the results of experiment which i deem less noisy in contrast to my previous attempt. Number admixed: 13 number of references: 2. Numsnps: 746877 numindivs: 55. Inference of...
Magnus Ducatus Lituaniae Project: A quick update to SupportMix's Chromosome Painting
http://magnusducatus.blogspot.com/2012/09/a-quick-update-to-supportmixs.html
Magnus Ducatus Lituaniae Project. Magnus Ducatus Lituaniae Project - BGA analysis project for the territories of former Grand Duchy of Lithuania. Admin: Vadim Verenich Co-admin: Leon Kull. Saturday, September 29, 2012. A quick update to SupportMix's Chromosome Painting. Mode on "windows" of 500 contiguous SNPs along a chromosome, slided by increments of 50. After that i cut out chromosome paintings of each chromosome from SupportMix's graphic output and aligned them to the scale of corresponding DIYD...
Magnus Ducatus Lituaniae Project: 2011-11-13
http://magnusducatus.blogspot.com/2011_11_13_archive.html
Magnus Ducatus Lituaniae Project. Magnus Ducatus Lituaniae Project - BGA analysis project for the territories of former Grand Duchy of Lithuania. Admin: Vadim Verenich Co-admin: Leon Kull. Monday, November 14, 2011. Some achievements of the MDL project. Looking back at the project's goals posited 6 months ago,. We would like to recapitulate some of the most important goals in order to analyzes how they have been achieved:. Graphoanalytical approach to visualizing relatedness. IBS similarity matrix in R.
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Artemis: Panasian-Part II: SE Asia
http://dioegenesartemis.blogspot.com/2011/06/panasian-part-ii-se-asia.html
Wednesday, 8 June 2011. Panasian-Part II: SE Asia. This part II is about continental SouthEast Asian populations from the Panasian dataset K=9 analysis I ran earlier. Some useful populations for comparison from part I. Are represented again- Their ADMXITURE component percentages are exactly the same since this is the very same run. These peoples in China are often lumped as "Miao" by the Han. Interestingly, Han Chinese foundational myths speak of the Miao. Where they largely didn't survive. Malays and Te...
Artemis: Not quite Egyptians?
http://dioegenesartemis.blogspot.com/2011/04/not-quite-egyptians.html
Friday, 29 April 2011. So continuing my search for Native North African components, I use the Dogon. As the West African pole. The Dogon are a people of Mali. Living in the Sahel region not far from the southern "shore" of the Sahara. They speak the Dogon language, presumed but not universally accepted as, a Niger-Congo language. So they are likely related, perhaps central to, the West African Neolithic Revolution Core. Any source for slaves carried by caravans to the North must have come from here.
Artemis: Old New World. Restricted pole run: Part II
http://dioegenesartemis.blogspot.com/2011/05/motherland-restricted-pole-run-part-ii.html
Wednesday, 11 May 2011. Old New World. Restricted pole run: Part II. The European results of my "restricted pole" supervised run of the Fertile Crescent area follow. This is the exact same run as this one. I have a few warnings to readers not familiar with the variability of ADMIXTURE results:. 1) ADMIXTURE is a bit stretched figuring out patterns representing components as close as these, particularly over 30.000 or so SNPs. So small components aren't very reliable. WMPC NC: synthesis of WMPC early intr...
Artemis: Back to Africa- individuals
http://dioegenesartemis.blogspot.com/2011/05/back-to-africa-individuals.html
Tuesday, 24 May 2011. Back to Africa- individuals. These are some of the individuals from the run. There is likely a lot of small component noise here, and also between NMPC, WMPC, EMPC due to their high similarity and small number of European individuals included). Their non-SubSaharan African ancestry is mostly composed of elements found in Europe as expected. There is very little East African ("Nilo-Saharan"). Subscribe to: Post Comments (Atom). View my complete profile. Back to Africa- populations.
Artemis: Back to Africa- populations
http://dioegenesartemis.blogspot.com/2011/05/back-to-africa-populations.html
Monday, 23 May 2011. Back to Africa- populations. I've been busy with unrelated stuff lately so didn't find time to post last week. I've decided to take a new look into variation within African populations, using the restricted pole trick I used before. In West Eurasian ones. I wanted to take a look at variation within the Niger-Congo or West African Neolithic Core variation in particular, by trying to split it up into 3 components. These were the poles chosen:. 1) Three Mandenka and two Dogon for a Nort...
Artemis: Clarifying my Departing Point
http://dioegenesartemis.blogspot.com/2011/03/clarifying-my-departing-point.html
Tuesday, 29 March 2011. Clarifying my Departing Point. I've started the current series of ADMIXTURE runs with an hypothesis I'm trying to test. I want to state it clearly and simply, because thats decisive in order for readers to understand the poles/experiments I'm guiding ADMIXTURE to do. Here is the hypothesis put as a simple model:. 3 Foragers don't invent or adapt to agricultural lifestyles because they do not possess such changes and can't develop them fast enough in most circumstances. They're...
Artemis: Unsupervised Northern Eurasia+new samples part 3
http://dioegenesartemis.blogspot.com/2011/04/unsupervised-northern-eurasianew_20.html
Wednesday, 20 April 2011. Unsupervised Northern Eurasia new samples part 3. In this last part of the unsupervised run I'll present results of New World populations and participants, and some South Asians I introduced into the run without South Asian populations (to avoid the artificial Irula modal component). As for the South Asian samples. I welcome samples from the area, was a little surprised to get 3 Tamil Brahmins. SIndia1 is mostly Tamil from Sri Lanka. UKIND is British with some Indian...Don't tak...
Artemis: Native Americans, Native Europeans, Native Siberians
http://dioegenesartemis.blogspot.com/2011/04/native-americans-native-europeans.html
Saturday, 9 April 2011. Native Americans, Native Europeans, Native Siberians. Trying to confirm previous runs showing "Amerindian" in North/West Europeans and in the Caucasus, I ran a more conventional supervised analysis. I set up the following poles:. 1 Egyptians once again representing the Fertile Crescent. 2 Nganasans, comprising the 5 less admixed individuals, but keeping the rest in the analysis (but out of the pole). This may be why the "Amerindian" component is quite chunky when analysed with the...
Artemis: Unsupervised Northern Eurasia+new samples part 1
http://dioegenesartemis.blogspot.com/2011/04/unsupervised-northern-eurasianew.html
Sunday, 17 April 2011. Unsupervised Northern Eurasia new samples part 1. I've rerun my previous unsupervised analysis. Of Northern Eurasia at K=7 with the new data. First part is about East Asia. I have a new Korean sample and two Philippine ones both from the Visayas. Results are basically identical, I'm only providing the new ones and a few reference populations. The colours are different and the bars have components in different positions. The spreadsheet will follow at the end of both parts. Searchin...
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Magnus Ducatus Lituaniae Project
Magnus Ducatus Lituaniae Project. Magnus Ducatus Lituaniae Project - BGA analysis project for the territories of former Grand Duchy of Lithuania. Admin: Vadim Verenich Co-admin: Leon Kull. Thursday, November 15, 2012. New add-on tool to MDLP World-22 calculator. Announced the release of a new tool Oracle AdMix4. Basically, you can think of this tool as an useful add-on that extends the Oracle two-population. Is the one you need to modify in order to use the tool on your own World-22 calculator results:.
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