Marijana Vujkovic, MSCE, PhD Post-Doctoral Fellow Div of Oncology, Children's Hospital of Philadelphia 4200 Colket Translational Research Building 3501 Civic Center Boulevard Philadelphia, PA 19104, USA Short Bio Marijana is a post-doctoral fellow in Bioinformatics at the division of Oncology at the Children's Hospital of Philadelphia starting March 2012. She specializes in computational methods in…
http://www.marijanavujkovic.com/
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Marijana Vujkovic | marijanavujkovic.com Reviews
https://marijanavujkovic.com
Marijana Vujkovic, MSCE, PhD Post-Doctoral Fellow Div of Oncology, Children's Hospital of Philadelphia 4200 Colket Translational Research Building 3501 Civic Center Boulevard Philadelphia, PA 19104, USA Short Bio Marijana is a post-doctoral fellow in Bioinformatics at the division of Oncology at the Children's Hospital of Philadelphia starting March 2012. She specializes in computational methods in…
marijanavujkovic.com
penncnv to manhattan | Marijana Vujkovic
http://marijanavujkovic.com/2014/09/23/cnv-to-manhattan-plots
September 23, 2014. Copy number variation (CNV) can help in understanding complex phenotypes and disease susceptibility. Numerous copy number analysis methods are currently available (penncnv, oncosnp), but they are somewhat difficult to interpret without visualization tools. Here I present a simple method of visualizing p-values from a simple chisquare comparisons of CNVs between cases and controls. It is very similar to the way that SNPs are analyzed in GWAS studies. Then with penn2temp, the pennCNV ou...
longitudinal GWAS | Marijana Vujkovic
http://marijanavujkovic.com/2015/02/20/longitudinal-gwas
February 20, 2015. Mixed effects models are a popular choice for modeling longitudinal data. Gauderman et al. (2003) summarized that this method in genome-wide analyses is represented by two basic approaches:. Results from these studies confirm an improved power when all time points are jointly analyzed. To obtain the code to go from plink to longGWAS visit my github (EMMA and FastLMM will follow shortly):. Longitudinal data analysis in pedigree studies. Genet Epidemiol 2003, 25, S18 S28. Http:/ research...
Affy to ASCAT | Marijana Vujkovic
http://marijanavujkovic.com/2013/05/31/cel2ascat
May 31, 2013. Adapted from the PennCNV website for ASCAT2.1 import. A guide to extract allele-specific signal values from raw Affymetrix CEL files using Affymetrix Power Tools software. Software and Library requirements. Reference File: hapmap.quant-norm.normalization-target.txt. Affymetrix GenomeWideSNP 6 library. Intermezzo 1: Make a file containing a list of all CEL files location. Ls -d $PWD/*.CEL CEL FILES LIST.txt. Sed -i '1s/ /cel files/' CEL FILES LIST.txt. 1 CEL to Allele-Specific Signals. Inter...
little tricks | Marijana Vujkovic
http://marijanavujkovic.com/2013/05/20/little-things
May 20, 2013. 1 A recursive copy, without overwriting existing files. Scp -r user@from:/dir/file user@to:/dir/file. Rsync -av user@from:/dir/file user@to:/dir/file. 2 deleting a range of jobs based the time they were submitted, using awk. Qstat awk '$7 "$18:22" {cmd="qdel " $1; system(cmd); close(cmd)}'. 3 creating a simple qsub script. Whatever command you would usually directly submit, like. Make the script executable with. Chmod x myShell.sh. And call the script with. For job status,. To kill a job.
Paper | Marijana Vujkovic
http://marijanavujkovic.com/2015/05/12/paper
May 12, 2015. My paper on the concordance on the. Detection of copy number alterations using ASCAT just got published in Cancer Genetics. Http:/ www.sciencedirect.com/science/article/pii/S2210776215000770. Concordance of copy number alterations using a common analytic pipeline for genome-wide analysis of Illumina and Affymetrix genotyping data: A report from the Children’s Oncology Group. Cancer Genetics, 2015 (in press). Click to share on Twitter (Opens in new window). Blog at WordPress.com.
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Marijana's Cookbook
Easy Fast Gourmet Set Menus. Essentials of Healthy Eating. Very important is to find out what your body is able to metabolize. What is healthy for one person is not necessarily healthy for another one. We all have different body types. Read more by clicking on. ESSENTIALS OF HEALTHY EATING. What is eco-friendly eating? Did you ever asked yourself this question? What is separate eating? How does it affect our digestive system? Read more by clicking on. ESSENTIALS OF HEALTHY EATING.
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supercalifragilisticexpialidocious | Nothing to do with me!
Nothing to do with me! SREČA te gleda, DŽAVO ti ne da! July 15, 2015. July 17, 2015. Ja sam vrlo aktivno radila na tome da u mom životu dođem do tzv. flat line . To je ono stanje uma, duše, tela kad godinama ne znaš koji je dan u sedmici, kad su ti svi dani kao u mrmota, kad godine brojiš samo po broju patika deteta i kad si doneo svesnu odluku da nema više uspona i padova zajebi, dosta je bilo! Jedan od takvih, baš istih, potpuno istih dana je i danas. See you in September . Biće vam super - veli to je ...
"Veseli drugašići" - Početna
Veseli drugašići". Projekt "Mi brinemo-We care". GODIŠNJA IZLOŽBA NAŠIH RADOVA SA KREATIVNE EKO RADIONICE. POZIVNICE ZA IZLOŽBU U OBLIKU NAJDRAŽE LJETNE POSLASTICE - SLADOLEDA. Drage mame, neka vam je sretan Majčin dan! Naša slika je obišla Švedsku, Italiju Španjolsku, Englesku, Njemačku, pa čak i Afriku. SRETAN DAN EUROPE -9. 5., žele vam vaši vršnjaci diljem svijeta. To smo mi, 2.a - NISMO LI PRESLATKI? PROLJETNI PANO 2.a RAZREDA. 2a Vam zeli sretan Dan zaljubljenih! Create a free website.
Marijana Vranic Photography | Photography
Hi, my name is Marijana Vranic. I am a Professional Photographer and Journalist located in the beautiful city of Novi Sad, Serbia. Checkyout my great work in my awesome online Portfolio.
Marijana Vujkovic
Marijana Vujkovic, MSCE, PhD. Div of Oncology, Children’s Hospital of Philadelphia. 4200 Colket Translational Research Building. 3501 Civic Center Boulevard. Philadelphia, PA 19104, USA. Marijana is additionally involved in the research of investigating variation in resources and practices in the care of children with AML by use of nationwide administrative data. It is anticipated that the required insights may eventually lead to novel recommendations and optimized clinical practices.
The creative world of painter and designer Marijana Zebeljan, an artist from Serbia/Montenegro.
Artwork 2005-2008 marijana zebeljan.
Marijan Ban: homepage
Raspored svih dogovorenih svirki pogledaj pod SVIRKE. Vaš Marijan Ban. 16112017. u 08:55.
Untitled Document
Marijan bloggt! – Der Blog von Marijan Kelava
Impressum & Über. OneCast Audio Editon Podcast. HowTo: Korrekte Darstellung von Geburtstagen bei importierten Kontakten auf Office 365. HUAWEI P9 erhält Android 7. Chrome Extension zeigt Facebooks AI Fähigkeiten. CES 2017: HP zeigt neues Lineup. Philips Hue bei mir zuhause. Seit einigen Wochen sind HUE Lampen teil unserer Wohnung. Meine Eindrücke habe ich in diesem Beitrag gesammelt. Google Photos auf den PC runterladen. Ich habe einen Weg gefunden. Dann hab ich da paar Vorschläge für dich. Endlich: Netf...
marijanca-ambos-aktuelles
Aus dem Zyklus in einer fremden Sprache. Weiler im Allgäu. 217–29.9.2013. Mit texten und tönen zum Thema Wasser. Am samstag, 21.9. um 19h.
