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Marine Microbial Eukaryote Transcriptome Sequencing Project :: Home

Or [ Register ]. Marine Microbial Eukaryote Transcriptome Sequencing Project. See also: iMicrobe's MMETSP Homepage with Access to Datasets. A collaboration between the National Center for Genome Resources, the Gordon and Betty Moore Foundation's Marine Microbiology Initiative, and the international marine microbial eukaryote research community sequenced the transcriptomes of 678 samples from hundreds of diverse organisms. The National Center for Genome Resources (NCGR). MMI and NCGR are soliciting nomina...

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Marine Microbial Eukaryote Transcriptome Sequencing Project :: Home | marinemicroeukaryotes.org Reviews

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Or [ Register ]. Marine Microbial Eukaryote Transcriptome Sequencing Project. See also: iMicrobe's MMETSP Homepage with Access to Datasets. A collaboration between the National Center for Genome Resources, the Gordon and Betty Moore Foundation's Marine Microbiology Initiative, and the international marine microbial eukaryote research community sequenced the transcriptomes of 678 samples from hundreds of diverse organisms. The National Center for Genome Resources (NCGR). MMI and NCGR are soliciting nomina...

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1 press release

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3 embargo

4 resources

5 gbmf's mmetsp website

6 de novo

7 time line

8 coupons

9 reviews

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Marine Microbial Eukaryote Transcriptome Sequencing Project :: Home | marinemicroeukaryotes.org Reviews

https://marinemicroeukaryotes.org

Or [ Register ]. Marine Microbial Eukaryote Transcriptome Sequencing Project. See also: iMicrobe's MMETSP Homepage with Access to Datasets. A collaboration between the National Center for Genome Resources, the Gordon and Betty Moore Foundation's Marine Microbiology Initiative, and the international marine microbial eukaryote research community sequenced the transcriptomes of 678 samples from hundreds of diverse organisms. The National Center for Genome Resources (NCGR). MMI and NCGR are soliciting nomina...

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marinemicroeukaryotes.org

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Marine Microbial Eukaryote Transcriptome Sequencing Project :: FAQ

http://www.marinemicroeukaryotes.org/home/faq

Or [ Register ]. Marine Microbial Eukaryote Transcriptome Sequencing Project. Rev April 10, 2015. How do I know the status of my approved sample(s)? You can track whether metadata forms have been QCed and entered in our database (usually within a week of receipt) and also the exact stage your sample is at (bar-code sample tube sent, sample QC, library construction, sequencing, assembly and annotation) by visiting:. Https:/ www.marinemicroeukaryotes.org/project organisms. As soon as the metadata forms are...

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Marine Microbial Eukaryote Transcriptome Sequencing Project :: Project Status

http://www.marinemicroeukaryotes.org/project_organisms

Or [ Register ]. Marine Microbial Eukaryote Transcriptome Sequencing Project. The "Encyclopedia of Life" ( http:/ www.eol.org. The taxonomy information has been edited by: Julia Metzner, Eunsoo Kim, Frederic Mahe, Adriane Jones and John Archibald. Stramenopila (SAR, Chromalveolata). Haptophyta (Hacrobia, Chromalveolata). Alveolata (SAR, Chromalveolata). Alveolata (SAR, Chromalveolata). Alveolata (SAR, Chromalveolata). Alveolata (SAR, Chromalveolata). Alveolata (SAR, Chromalveolata).

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Marine Microbial Eukaryote Transcriptome Sequencing Project :: Embargo

http://www.marinemicroeukaryotes.org/home/embargo

Or [ Register ]. Marine Microbial Eukaryote Transcriptome Sequencing Project. Data Release Policy and Embargo Period Structure. Marine Microbial Eukaryote Transcriptome Sequencing Project. October 19, 2010. 1 Exclusive use of data by researchers who submit samples: 0 6 months. NCGR will provide transcriptome assemblies and annotations to CAMERA. Within 15 days of the completion of annotation. CAMERA. Researchers will have exclusive access to and use of their data for 6 months. CAMERA. Following the unres...

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Marine Microbial Eukaryote Transcriptome Sequencing Project :: Press Release

http://www.marinemicroeukaryotes.org/home/press_release

Or [ Register ]. Marine Microbial Eukaryote Transcriptome Sequencing Project. November 9, 2010. Santa Fe, New Mexico USA. Sequencing project aims to uncover new knowledge about ocean microeukaryotes. The National Center for Genome Resources. NCGR) and the Gordon and Betty Moore Foundation. GBMF) Marine Microbiology Initiative. Nominations for transcriptome sequencing will be solicited from the international scientific community in November 2010, and over the next eighteen months NCGR will sequence the tr...

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Marine Microbial Eukaryote Transcriptome Sequencing Project :: Resources

http://www.marinemicroeukaryotes.org/resources

Or [ Register ]. Marine Microbial Eukaryote Transcriptome Sequencing Project. Keeling PJ et al. (2014) The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing. PLoS Biol 12(6) PLoS Biol 12(6). E1001889. doi:10.1371/journal.pbio.1001889. For a full list of MMETSP-related publications please visit GBMF's MMETSP project page. A CAMERA http:/ camera.calit2.net/mmetsp/. We recommend that y...

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Marine Microbes! What to do with all the data? | Lisa Johnson Cohen

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Notes on PhD research learning R, Python and Linux for bioinformatics and genomic-scale data analyses. Intro git – Lab meeting. Computing Workflows for Biologists – Dr. Tracy Teal →. What to do with all the data? April 7, 2016. UPDATE: Check out Titus’ blog post, Bashing on monstrous sequencing collections. Since Sept 2015, I’ve been a PhD student in. C Titus Brown’s lab. Working with data from. Moore’s Marine Microbial Eukaryotic Transcriptome Sequencing Project (MMETSP). Keeling et al 2014. 8211; left,.

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Bowman Lab: Marine microbial ecology. Paprica on the cloud. New paper published in ISME Journal →. Paprica v0.4.0. January 8, 2017. I’m happy to announce the release of paprica v0.4.0. This release adds a number of new features to our pipeline for evaluating microbial community and metabolic structure. These include:. NCBI taxonomy information for each point of placement on the reference tree, including internal nodes. One way to get around this scale problem is to focus on eukaryotic. Because much of th...

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How I learned to stop worrying and love subsampling (rarifying) |

http://www.polarmicrobes.org/how-i-learned-to-stop-worrying-and-love-subsampling-rarifying

Bowman Lab: Marine microbial ecology. Exploring genome content and genomic character with paprica and R. Astrobiology Primer v2 →. How I learned to stop worrying and love subsampling (rarifying). July 12, 2016. I have had the 2014 paper “. Waste Not, Want Not: Why Rarefying Microbiome Data is Inadmissable. Have information that can be used to estimate the true abundance of taxa among samples. The question is how much of a difference does it really make? McMurdi and Holmes advocate using methods adopted f...

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marinemicroeukaryotes.org

Marine Microbial Eukaryote Transcriptome Sequencing Project :: Home

Or [ Register ]. Marine Microbial Eukaryote Transcriptome Sequencing Project. See also: iMicrobe's MMETSP Homepage with Access to Datasets. A collaboration between the National Center for Genome Resources, the Gordon and Betty Moore Foundation's Marine Microbiology Initiative, and the international marine microbial eukaryote research community sequenced the transcriptomes of 678 samples from hundreds of diverse organisms. The National Center for Genome Resources (NCGR). MMI and NCGR are soliciting nomina...

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