Mascot software from Matrix Science - identification, characterisation and quantitation of proteins using mass spectrometry data
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Mascot search engine | Protein identification software for mass spec data | matrixscience.com Reviews
https://matrixscience.com
Mascot software from Matrix Science - identification, characterisation and quantitation of proteins using mass spectrometry data
matrixscience.com
Mascot Parser | an object-oriented API to Mascot result files and configuration files
http://www.matrixscience.com/msparser.html
An introduction to Mascot Parser. Mascot Parser provides an object-oriented Application Programmer Interface (API) to Mascot result files and configuration files, making it easy for programs written in C , Java or Perl to access Mascot results. Mascot Parser is available in the following formats:. A Java library for Windows, Linux, Solaris, and AIX. A Perl module for Windows (ActivePerl), Linux, Solaris, and AIX. A DLL or statically linked library containing C library code for Windows. Please note that M...
Mascot Server training | Course outline
http://www.matrixscience.com/training.html
Learn how to get the best out of Mascot directly from the people who develop and support it. We have created an intensive 2-day course that covers every aspect of protein identification and characterisation using Mascot. The material is available in two formats: a live, two day course. The three ways to search MS and MS/MS data. Why searches can fail. A detailed look at each of the search parameters. Tips and common mistakes. Which database to choose. Different ways of finding a match.
Mascot training free webcast course presentations with exercises and examination
http://www.matrixscience.com/training_webcast.html
The video presentations are streamed from a separate server. After reading this page, follow this link. To the summary page. If there are any technical problems accessing or viewing the material or if you have suggestions to improve the course, please email training@matrixscience.com. The webcast presentations describe the current version of Mascot Server. If you are using an earlier version, features added in later releases will be missing and there will be differences in the forms and reports. ...
Mascot Distiller | Interface to a range of binary mass spectrometry data files
http://www.matrixscience.com/distiller.html
An introduction to Mascot Distiller. Mascot Distiller Workstation offers a single, intuitive interface to a wide range of native (binary) mass spectrometry data files. A unique algorithm, which fits each peak to a calculated isotope distribution, processes the raw data into high quality, de-isotoped peak lists. Sequencing, and batch processing. There is also a developer’s package that provides access to the API of the underlying COM library. Similar approaches have been described by. C peak. The char...
Mascot database search help index
http://www.matrixscience.com/help.html
Mascot database search Database search help. Mascot – General. A History of Mascot and Mowse. Summary Reports for PMF. Summary Reports for MS/MS. PC Hardware for Mascot Server. AB SCIEX Data Explorer. AB SCIEX 4000 / 5000 Series (TOF/TOF). ASMS User Meeting presentations.
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Supplementary Information
http://www.kendricklabs.com/Otherlab.htm
Recommended Mass Spectrometry Core Facility. Clarkson University Proteomics Laboratory. Contact: Dr. Costel Darie 315-268-7763, cdarie@clarkson.edu. Interpreting Electrospray Mass Spectra. Protein Sequencing and ID Using Tandem Mass Spectrometry. A gene's mRNA level does not necessarily predict its protein level. 2014): Prokaryotic proteins are more easily identified than eukaryotic ones by peptide mass fingerprinting. Kendrick Labs performs a 2D western blot analysis of Elisa antibodies used for detecti...
Mascot database search help index
http://bio-mascot1.chem.umu.se/mascot/help.html
Mascot database search Database search help. Mascot – General. A History of Mascot and Mowse. Summary Reports for PMF. Summary Reports for MS/MS. PC Hardware for Mascot Server. AB SCIEX Data Explorer. AB SCIEX 4000 / 5000 Series (TOF/TOF). ASMS User Meeting presentations.
Bioinformatics tools | Laboratory vetmedzg
http://laboratory.vetmedzg.eu/bioinformatics-tools
Darr; Skip to Main Content. Please follow & like us :). GenBank: http:/ www.ncbi.nlm.nih.gov/genbank/. Unigene: http:/ www.ncbi.nlm.nih.gov/unigene. PCR Designer: http:/ primer1.soton.ac.uk/primer.html. GenBank BLAST: http:/ www.ncbi.nlm.nih.gov/BLAST.cgi. Ensembl: http:/ www.ensembl.org/index.html. Uniprot: http:/ www.uniprot.org. PeptIdent: http:/ www.pdg.cnb.uam.es/cursos/BioInfo2004/pages/visualizacion/programas manuales/spdbv userguide/us.expasy.org/tools/peptident.html.
Proteomics Wiki:Instrumentation Software - Proteomics Wiki
http://proteowiki.crg.eu/wiki/Proteomics_Wiki:Instrumentation_Software
As a proteomics reference center, the CRG/UPF Proteomics Unit. Has state-of-the-art equipment including three high-resolution mass spectrometers, five high pressure liquid chromatographers, one electrophoresis system for one and two-dimensional gels, and other support systems, thus covering the main techniques of field proteomics. All instrumentation is available to scientific research groups in the institute and also to external users. Software suites and packages. Thermo LTQ Orbitrap XL. MRMPilot v2...
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Mascot search engine | Protein identification software for mass spec data
Welcome to the home of Mascot software, the benchmark for identification, characterisation and quantitation of proteins using mass spectrometry data. Here, you can learn more about the tools developed by Matrix Science to get the best out of your data, whatever your chosen instrument. March 14, 2018. In late 2016, NCBI dropped support for HTTP requests and restricted their web resources to HTTPS. EBI went HTTPS by [.]. Mascot Daemon is a batch automation utility, bundled with Mascot Server.
Research Chemicals | Building Blocks | Matrix Scientific
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