waynemaddisonlab.wordpress.com
Mesquite 3.01 released | Wayne Maddison Lab
https://waynemaddisonlab.wordpress.com/2014/09/19/mesquite-3-01-released
Jumping Spiders and Phylogeny. Skip to primary content. Mesquite 3.01 released. This entry was posted in Uncategorized. I am a biologist at the Beaty Biodiversity Museum (University of British Columbia), studying spider diversity and evolution. My specialty is jumping spiders (Salticidae). View all posts by Wayne Maddison →. Leave a Reply Cancel reply. Enter your comment here. Fill in your details below or click an icon to log in:. Address never made public). Notify me of new comments via email.
en.wikipedia.org
Nexus file - Wikipedia, the free encyclopedia
https://en.wikipedia.org/wiki/Nexus_file
From Wikipedia, the free encyclopedia. For the NeXus format used in neutron, x-ray, and muon scattering, see Nexus (data format). Usually .nex or .nxs) is widely used in bioinformatics. Several popular phylogenetic programs such as PAUP*. Command inside square brackets [ and ] are ignored (comment). Each block starts with. BEGIN block name;. An example for a simple DNA alignment would be:. NEXUS Begin data; Dimensions ntax=4 nchar=15; Format datatype=dna missing=? 4): 590 621. doi. Additional terms may a...
julieaherman.com
Resources | The Great Plant Science Adventure
https://julieaherman.com/resources
The Great Plant Science Adventure. Diversity, defense, and speciation. Many of these can be used to kickstart independent data mining projects! Repository of many phylogenetic trees and large datasets that have been published. Repository of most if not all genetic sequences referred to in publications. An aggregator for sequences by taxonomic classification and locus. Genes and information on biosynthetic pathways. A tool for putting dates on/calibrating phylogenetic trees. A phylogenetic tree viewer.
waynemaddison.wordpress.com
August | 2015 | Reflections on a Spider's Eyes
https://waynemaddison.wordpress.com/2015/08
Reflections on a Spider's Eyes. Wayne Maddison's blog: Discovering spiders, evolutionary history, and the world. Skip to primary content. Skip to secondary content. Monthly Archives: August 2015. Mesquite 3.04 released. David’s been visiting here for a few days, and we’ve used the chance to work on Mesquite, which has led to our releasing version 3.04. News from the field, thoughts bouncing around in my head, and beauty shared. Quest for a tidal spider. Real life cryptozoology: the green-faced Habronattus.
waynemaddison.wordpress.com
Reflections on a Spider's Eyes | Wayne Maddison's blog: Discovering spiders, evolutionary history, and the world | Page 2
https://waynemaddison.wordpress.com/page/2
Reflections on a Spider's Eyes. Wayne Maddison's blog: Discovering spiders, evolutionary history, and the world. Skip to primary content. Skip to secondary content. Newer posts →. The new Andean jumping spider genus Urupuyu and a revised classification of the Amycoida. Male 2015 W. Maddison, Creative Commons Attribution (CC-BY) 3.0 license. From the Quechua words for spider (. Belshaw’s Quick Key to the Non-Motile Phyla. And now the second part to Belshaw’s guide to biodiversity, a key to non-motil...
waynemaddison.wordpress.com
MacClade’s 30th Anniversary | Reflections on a Spider's Eyes
https://waynemaddison.wordpress.com/2016/06/21/macclades-30th-anniversary
Reflections on a Spider's Eyes. Wayne Maddison's blog: Discovering spiders, evolutionary history, and the world. Skip to primary content. MacClade’s 30th Anniversary. Today is MacClade’s. Both conceptually and as some code translated straight from Pascal into Java). Happy Birthday, MacClade! This entry was posted in Uncategorized. One thought on “ MacClade’s 30th Anniversary. 21 June 2016 at 4:29 pm. I hope you get a nice b-day present from your grandchild Mesquite. Leave a Reply Cancel reply.
eukref.org
Curation pipeline overview - EukRef
http://eukref.org/curation-pipeline-overview
Building your reference database. Tools necessary to install to run the pipeline are listed below. You should install each of these programs on your computer. Version 8.1 or newer; free 32 bit version is fine). Version 8 or newer). You can find some tips on the use of RAxML at the bottom of the page. BLAST (version 2.2.22). Should already be installed). Or equivalent text editor for taking notes about the curation process, modifying scripts, and viewing files. Do NOT use Word or equivalent. Three possibl...