monarch-initiative.blogspot.com
Monarch Initiative: October 2014
http://monarch-initiative.blogspot.com/2014_10_01_archive.html
Enabling navigation across a rich landscape of phenotypes, diseases, models, and genes for translational research. Wednesday, October 8, 2014. How Monarch Integrates and Curates Biological Data. As with most biomedical databases, the first step is to identify relevant data from the research community. The Monarch Initiative. Gene variants (including SNPs, SNVs, QTLs, CNVs, and other rearrangements big and small). Models (including cell lines, animal strains, species, breeds, as well as targeted mutants).
animalgenome.org
Animal QTL Database
http://www.animalgenome.org/cgi-bin/QTLdb/index
Apr 29, 2016). The Animal Quantitative Trait Loci (QTL) Database (Animal QTLdb) strives to collect all publicly available trait mapping data, i.e. Many scientific journals require or recommend that any original QTL/association data be deposited into a public database before a paper may be accepted for publication. We provide user/curator accounts for direct data submission, and supply users with a data summary link to facilitate the manuscript review process. This graph is partly adopted from. Publicatio...
swat4ls.org
Keynotes | Semantic Web Applications and Tools for Life Sciences
http://www.swat4ls.org/workshops/cambridge2015/keynotes
Tutorials – 7th December. Main Conference 8th – 9th December. Hackathon – 10th December. Keynote Title: “Not everyone can become a great artist; but a great artist can come from anywhere”: Envisioning a world where everyone helps solve disease. The answer is all of us – the clinician, the basic researcher, the author, the biocurator, the informaticist, the publisher, the patient, and more. Here, we explore the bucket brigade that it takes to support a semantic disease discovery framework. SWATLS 2015 is ...
animalgenome.org
Animal QTL Database
http://www.animalgenome.org/QTLdb
Apr 29, 2016). The Animal Quantitative Trait Loci (QTL) Database (Animal QTLdb) strives to collect all publicly available trait mapping data, i.e. Many scientific journals require or recommend that any original QTL/association data be deposited into a public database before a paper may be accepted for publication. We provide user/curator accounts for direct data submission, and supply users with a data summary link to facilitate the manuscript review process. This graph is partly adopted from. Publicatio...
ohsu.edu
OHSU Library | OHSU Library | OHSU
http://www.ohsu.edu/library
Search all of OHSU. Search the Library Website. Interlibrary Loan/Document Delivery Service. Theses, Dissertations, Capstones, and Portfolios. The Oregon Health and Science University (OHSU) Library, the largest health sciences library in Oregon, serves the faculty, staff and students of OHSU, as well as health professionals and residents of the State of Oregon. See hours, locations and more. Articles by OHSU Authors. Historical Collections and Archives. And the Graduate LRC at the CLSB. 24 hours a day.
human-phenotype-ontology.github.io
New HPO Release (April) | Human Phenotype Ontology
http://human-phenotype-ontology.github.io/2016/04/01/release_april.html
New HPO Release (April). April 1, 2016. HPO release - April 2016. We have just published a new HPO release for April 2016. This includes the HPO ontology. IMPORTANT: This does NOT include the associated annotations. Due to the recent change of the OMIM license. We do not (until further notice) make our updates to the annotations available. We hope that the licensing discussions will soon be successful! This new release comes again with a lot of changes:. A lot new terms. And list of commits.
human-phenotype-ontology.github.io
Downloads | Human Phenotype Ontology
http://human-phenotype-ontology.github.io/downloads.html
In general, users should always use the PURL (persistent URL) to access the HPO-data, i.e. Http:/ purl.obolibrary.org/obo/hp.obo. Http:/ purl.obolibrary.org/obo/hp.owl. This currently re-directs you to our Hudson/Jenkins page. Hudson/Jenkins are continuous integration systems, that will provide stable releases. The annotation files (e.g. phenotype annotation.tab) from our Hudson/Jenkins page. The format of the annotation file is explained under Documentation. Phenotype annotation hpoteam.tab. To link bet...
human-phenotype-ontology.github.io
Translations of HPO | Human Phenotype Ontology
http://human-phenotype-ontology.github.io/2016/05/06/translations.html
May 6, 2016. Translations of HPO into multiple languages. The guys at crowdin. Were so nice to give us a free account to host the translation project for HPO. We already have a lot of content translated to spanish, italian and german (see our github project. Please join this effort at crowdin: HPO translation. If you have any questions or seek for other ways to provide translations.
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