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Dekker Lab : Welcome

In order to determine the spatial organization of chromosomes at high resolution we have developed the Chromosome Conformation Capture technology, commonly referred to as 3C (Dekker et al. (2002), Science, 295: 1306-1311). 3C is used to detect physical interactions between pairs of genomic loci. 3C is now widely used and has proven to be a very powerful tool to detect cis- and trans-interactions between genes and regulatory elements. To facilitate 5C experiment workflow, a full suite of web-based tools w...

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Dekker Lab : Welcome | my5c.umassmed.edu Reviews
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In order to determine the spatial organization of chromosomes at high resolution we have developed the Chromosome Conformation Capture technology, commonly referred to as 3C (Dekker et al. (2002), Science, 295: 1306-1311). 3C is used to detect physical interactions between pairs of genomic loci. 3C is now widely used and has proven to be a very powerful tool to detect cis- and trans-interactions between genes and regulatory elements. To facilitate 5C experiment workflow, a full suite of web-based tools w...
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1 welcome
2 collaborations
3 my5c primers
4 my5c uploads
5 my5c heatmap
6 my3c primers
7 my3c uploads
8 my3c plot
9 welcome to 3dg
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Dekker Lab : Welcome | my5c.umassmed.edu Reviews

https://my5c.umassmed.edu

In order to determine the spatial organization of chromosomes at high resolution we have developed the Chromosome Conformation Capture technology, commonly referred to as 3C (Dekker et al. (2002), Science, 295: 1306-1311). 3C is used to detect physical interactions between pairs of genomic loci. 3C is now widely used and has proven to be a very powerful tool to detect cis- and trans-interactions between genes and regulatory elements. To facilitate 5C experiment workflow, a full suite of web-based tools w...

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Just Compiling | A space to share thoughts on computational systems biology

https://blogs.discovery.wisc.edu/compsysbio

A space to share thoughts on computational systems biology. Skip to primary content. Skip to secondary content. Regulatory networks in blood cells. September 5, 2015. 1 Göttgens, Berthold. “Regulatory network control of blood stem cells.”. 125 (April 2015): 2614-2620. Predicting spatio-temporal patterns of expression. November 7, 2014. An open question in gene regulation is how spatio-temporal patterns of gene expression is encoded in the genome. We discussed this paper. August 25, 2014. The work specifi...

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Dekker Lab : Welcome

In order to determine the spatial organization of chromosomes at high resolution we have developed the Chromosome Conformation Capture technology, commonly referred to as 3C (Dekker et al. (2002), Science, 295: 1306-1311). 3C is used to detect physical interactions between pairs of genomic loci. 3C is now widely used and has proven to be a very powerful tool to detect cis- and trans-interactions between genes and regulatory elements. To facilitate 5C experiment workflow, a full suite of web-based tools w...

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