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Next Generation Cassava Breeding Project

Why is cassava important? Cassava ( Manihot esculenta. A major staple crop, is the main source of calories for 500 million people across the globe. Cassava in the News. More NextGen Blog ». Access to data and tools for breeders and researchers, including genomic selection algorithms and analysis capacity, a cassava genome browser, cassava ontology tools, phenotyping tools, and social networking. College of Agriculture and Life Sciences, Cornell University, USA. Makerere University, Uganda. Is a Research ...

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Next Generation Cassava Breeding Project | nextgencassava.org Reviews
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Why is cassava important? Cassava ( Manihot esculenta. A major staple crop, is the main source of calories for 500 million people across the globe. Cassava in the News. More NextGen Blog ». Access to data and tools for breeders and researchers, including genomic selection algorithms and analysis capacity, a cassava genome browser, cassava ontology tools, phenotyping tools, and social networking. College of Agriculture and Life Sciences, Cornell University, USA. Makerere University, Uganda. Is a Research ...
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Next Generation Cassava Breeding Project | nextgencassava.org Reviews

https://nextgencassava.org

Why is cassava important? Cassava ( Manihot esculenta. A major staple crop, is the main source of calories for 500 million people across the globe. Cassava in the News. More NextGen Blog ». Access to data and tools for breeders and researchers, including genomic selection algorithms and analysis capacity, a cassava genome browser, cassava ontology tools, phenotyping tools, and social networking. College of Agriculture and Life Sciences, Cornell University, USA. Makerere University, Uganda. Is a Research ...

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Next Generation Cassava Breeding Project

http://www.nextgencassava.org/index.html

Why is cassava important? Cassava ( Manihot esculenta. A major staple crop, is the main source of calories for 500 million people across the globe. Genomic Selection is a new plant breeding method that uses statistical modeling to predict how a plant will perform, before it is field-tested. RTB develops partnerships with US universities for gender research. Read more at the NextGen Blog ». Access to data and tools for breeders and researchers, including genomic selection algorithms and analysis capacity,...

2

Next Generation Cassava Breeding Project

http://www.nextgencassava.org/genomic_select.html

Figure 1: The 'training population' is genotyped and phenotyped to 'train' the genomic selection (GS) prediction model. Genotypic information from the breeding material is then fed into the model to calculate genomic estimated breeding values (GEBV) for these lines. From Heffner et al. 2009 Crop Sci. 49:1 12. What is Genomic Selection? The significant advantage of genomic selection is that phenotyping for lines for which GEBVs have been calculated can be done after. In conventional cassava breeding, new ...

3

Next Generation Cassava Breeding Project

http://www.nextgencassava.org/people.html

The NEXTGEN Cassava family lost Martha Hamblin on March 15, 2015 to ocular melanoma. NEXTGEN Cassava Project Meeting (February 2015 in Kampala, Uganda). Lukas Mueller is a biochemist and bioinformatician who has been involved with large plant genome databases for many years. Initially working at Arabidopsis database TAIR. He has been directing the SGN database. Dunia Pino Del Carpio. Roberto Jesus Lozano Gonzalez del Valle, Cornell PhD Student. Peter T. Hyde. Tammy Thomas has worked with finance and huma...

4

Next Generation Cassava Breeding Project

http://www.nextgencassava.org/about.html

Cassava roots are processed and eaten by 500 million people a day in Africa, where it is a staple for 40% of the population. Photo courtesy of Hale Tufan, Cornell University. NEXTGEN Cassava will invest in human and infrastructure capacity at partner breeding programs; develop methods to increase flowering and seed set in cassava; create a database ( www.cassavabase.org. Cassava ( Manihot esculenta. Cassava is important for food security in Africa. At the Plant and Animal Genomes conference in 2011, cass...

5

Next Generation Cassava Breeding Project

http://www.nextgencassava.org/objectives.html

Objective 1: Fast Cassava-Improved Reproduction. Objective 2: Tools for Genomic Selection Implemented. Dunia Pino Del Carpio (Cornell). Objective 3: Database Developed and Curated. Objective 3 gives cassava breeders and researchers access to data and tools in a centralized, user-friendly and reliable database. A database (Cassavabase, www.cassavabase.org. Dunia Pino Del Carpio (Cornell). Objective 4: Germplasm Developed. Objective 5: Infrastructure Developed and Plant Breeders Trained. Access to data and...

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dpt44 | Next Generation Cassava

https://nextgencassava.wordpress.com/author/dpt44

Blog for the Next Generation Cassava Project. NextGen PhD Student Visits Cornell for training on Prediction Modeling. Olumide Alabi, NextGen Cassava PhD student with the International Institute for Tropical Agriculture (IITA) in Ibadan, Nigeria, recently visited Jean-Luc Jannink’s laboratory group at Cornell University for training on prediction modeling. Olumide reports on his visit here:. Three major objective activities included:. The prediction modeling for the IITA-Genomic Selection. Hence, the r.

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NEXTGEN Students and Postdoc Attend Genomic Selection Course in Aarhus, Denmark | Next Generation Cassava

https://nextgencassava.wordpress.com/2015/07/07/nextgen-students-and-postdoc-attend-genomic-selection-course-in-aarhus-denmark

Blog for the Next Generation Cassava Project. NEXTGEN Students and Postdoc Attend Genomic Selection Course in Aarhus, Denmark. Ismail Kayondo, Dunia Pino del Carpio, and Olumide Alabi at Aarhus University. Day 1: Background on genomic selection; classical MAS; basic prediction using GWAS; environmental effects. Snp select = which(gwas BW results[,4] 2.7e-5). Lm(dat train$BW factor(dat train$Sex) factor(dat train$Batch) geno train$V2). I initially found it difficult to comprehend some aspects of the day 3...

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Related Links | Ripe

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For sustainable increases in crop yield. International Rice Research Institute. IRRI aims to reduce poverty and hunger, improve the health of rice farmers and consumers, and ensure environmental sustainability of rice farming. They do these through collaborative research, partnerships, and the strengthening of the national agricultural research and extension systems, or NARES, of the countries we work in. Durable Rust Resistance in Wheat project. The project seeks to mitigate rust threats through coordin...

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Ugandan and Nigerian Scientists Attend CIAT Training in Cali, Colombia | Next Generation Cassava

https://nextgencassava.wordpress.com/2015/06/08/ugandan-and-nigerian-scientists-attend-ciat-training-in-cali-colombia

Blog for the Next Generation Cassava Project. Ugandan and Nigerian Scientists Attend CIAT Training in Cali, Colombia. Ugandan and Nigerian scientists attend a training at CIAT in Cali, Colombia. This entry was posted in News. New Cornell Greenhouse Houses NEXTGEN Cassava Plants. NEXTGEN Students and Postdoc Attend Genomic Selection Course in Aarhus, Denmark →. Leave a Reply Cancel reply. Enter your comment here. Fill in your details below or click an icon to log in:. Address never made public). NextGen C...

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New Cornell Greenhouse Houses NEXTGEN Cassava Plants | Next Generation Cassava

https://nextgencassava.wordpress.com/2015/05/28/new-cornell-greenhouse-houses-nextgen-cassava-plants

Blog for the Next Generation Cassava Project. New Cornell Greenhouse Houses NEXTGEN Cassava Plants. Thanks to Anja Timm and Craig Cramer for a great post about the new greenhouses on Cornell’s campus that house the NEXTGEN Cassava Project’s cassava plants! Cassava plants in the new greenhouse. Photo courtesy of Anja Timm. From Anja Timm ( ait4@cornell.edu. Cornell University Agricultural Experiment Station. Read Anja’s full post. This entry was posted in News. Leave a Reply Cancel reply. You are commenti...

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GPC Community | Global Plant Council

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Plant Science for Global Challenges. Cassava brown streak: lessons from the field. September 18, 2016. This week’s post was written by Katie Tomlinson. A PhD student at the University of Bristol, UK, who spent three months as an intern at the National Crops Resource Research Institute in Uganda. She fills us in on the important research underway at the Institute, and how they communicate their important results to local farmers and benefit rural communities. Cassava is a staple food crop for approximatel...

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4 Innovations For Poor Farmers. DON'T HAVE AN ACCOUNT? My Profile and Settings. DON'T HAVE AN ACCOUNT? My Profile and Settings. 4 Innovations For Poor Farmers. Whenever I visit small farmers in a poor country, I’m struck by how many are laboring with hoes, plows, and other implements that haven’t changed in generations. Yet farmers in wealthier countries have benefited from wave after wave of technological improvements. This gap is one big reason why some farmers produce much more food than others. Becom...

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Next Generation Cassava Breeding Project

Why is cassava important? Cassava ( Manihot esculenta. A major staple crop, is the main source of calories for 500 million people across the globe. Cassava in the News. More NextGen Blog ». Access to data and tools for breeders and researchers, including genomic selection algorithms and analysis capacity, a cassava genome browser, cassava ontology tools, phenotyping tools, and social networking. College of Agriculture and Life Sciences, Cornell University, USA. Makerere University, Uganda. Is a Research ...

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Next Generation Cassava | Blog for the Next Generation Cassava Project

Blog for the Next Generation Cassava Project. NEXTGEN Students and Postdoc Attend Genomic Selection Course in Aarhus, Denmark. Ismail Kayondo, Dunia Pino del Carpio, and Olumide Alabi at Aarhus University. Day 1: Background on genomic selection; classical MAS; basic prediction using GWAS; environmental effects. Snp select = which(gwas BW results[,4] 2.7e-5). Lm(dat train$BW factor(dat train$Sex) factor(dat train$Batch) geno train$V2). I initially found it difficult to comprehend some aspects of the day 3...

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