Real-time tracking of Zika virus evolution. Broad Viral Genomics Group. Stalin Raj et al. Built by Richard Neher. Give us a shout at @richardneher. With questions or comments. All source code. Is freely available under the terms of the GNU Affero General Public License. Stalin Raj et al. We also thank the ZiBRA project. For championing real-time data sharing and genomic surveillance:. 2015-2016 Trevor Bedford and Richard Neher.
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nextstrain / zika | nextstrain.org Reviews
https://nextstrain.org
Real-time tracking of Zika virus evolution. Broad Viral Genomics Group. Stalin Raj et al. Built by Richard Neher. Give us a shout at @richardneher. With questions or comments. All source code. Is freely available under the terms of the GNU Affero General Public License. Stalin Raj et al. We also thank the ZiBRA project. For championing real-time data sharing and genomic surveillance:. 2015-2016 Trevor Bedford and Richard Neher.
Affiliates
http://www.zibraproject.org/affiliates
We are proud to be working with some super cool people:. Website provides a dynamic visualisation of the Zika public sequences posted so far. This website is made by the excellent Trevor Bedford and Richard Neher. Web forum is a place to discuss genome sequencing in viral epidemics. We will post updates to this website. Zika research is happening in the open, here are some useful online resources:. Website run by the World Health Organization tracks open resources published in their Bulletin. The Zibra p...
Real-time evolutionary tracking for pathogen surveillance and epidemiological investigation | Open Science Prize
https://www.openscienceprize.org/p/s/2023040
Skip to main content. Raquo; Real-time evolutionary . Laquo; Back to Submissions. Real-time evolutionary tracking for pathogen surveillance and epidemiological investigation. That is continually updated as new data becomes available. This platform pools data from across research groups thereby synthesizing disparate datasets and serves to promote open science in the face of public health crises. All source code is publicly available at github.com/nextstrain. Our platform has three key components. Forum o...
Open Science Prize
https://www.openscienceprize.org/res/p/finalists
Skip to main content. Open Science Prize winners. For Phase I of the Open Science Prize, six winning teams have each received prizes of $80,000 to develop their prototypes. Read more about the Prize winners below (teams listed in no particular order):. Fruit Fly Brain Observatory. MyGene2: Accelerating Gene Discovery with Radically Open Data Sharing. OpenAQ: A Global Community Building the First Open, Real-Time Air Quality Data Hub for the World. Fruit Fly Brain Observatory. Using computational disease m...
Diary: June 10 Reflections
http://www.zibraproject.org/blog/june-10-reflections
Diary: June 10 Reflections. Jun 10, 2016. I’m at the Rio airport now, heading home after 9 days in Brazil as part of the ZiBRA ground team. As part of the team, I traveled from Natal to Recife along the northeastern coast collecting clinical samples for mobile Zika genome sequencing and analysis. This has been an illuminating experience and I’m grateful to Nick, Nuno, Luiz and the rest of the team. For inviting me to be part of this. This was a major issue for much of the West African Ebola outbreak.
Wrangling metadata
http://www.zibraproject.org/blog/metadata-wrangling
Jun 8, 2016. I’ve been working from nextstrain-db. Which was built by Charlton Callender. A very talented undergraduate at the University of Washington, to manage sequence data and associated metadata for nextstrain. Builds. The basic strategy has been to have an AWS instance running a RethinkDB. We’re running the app Chateau. To provide a web UI for making changes to individual-samples in the database, while larger modifications are done through Python interaction scripts that can upload tsv files.
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Nextstra Consulting LLP - Management Consulting Firm, Pune, INDIA
IT Enabled Process Improvement. Program Management and Governance. IT Strategy and Enterprise Architecture. Oracle Applications eBusiness and SAP Consulting. Enterprise Application Health Check. Nextstra in the News. Nextstra is a consulting firm providing. Tegic consulting solutions in the area of strategy, operations, technology and enterprise IT solutions. We partner with businesses providing strategic advice that empowers senior executives to deliver sustainable growth. We provide business specific c...
nextstrain / zika
Real-time tracking of Zika virus evolution. Broad Viral Genomics Group. Stalin Raj et al. Built by Richard Neher. Give us a shout at @richardneher. With questions or comments. All source code. Is freely available under the terms of the GNU Affero General Public License. Stalin Raj et al. We also thank the ZiBRA project. For championing real-time data sharing and genomic surveillance:. 2015-2016 Trevor Bedford and Richard Neher.
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