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Natural Ligand DB

Perfect match (for non-ID keywords). Query: PDB entry ID, PDB Classification, Molecule name, Molecule synonym, Organism, EC#, UniProt accession number, Ligand name, PDB CCD ID, KEGG Pathway ID, KEGG reaction ID, KEGG Compound ID, rs number, OMIM ID, . Examples: 1dgk, Transferase, Hexokinase, HK l, homo sapiens, 2.7.1.1, P19367, Alpha-D-Gulcose, GLC, rn00521, C00031. Enter some KEGG compound IDs (delimited by a space or a line break). Examples: C00008 C00092 C04006 C00363 C04767 C00002.

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Natural Ligand DB | nldb.hgc.jp Reviews

<META> DESCRIPTION

Perfect match (for non-ID keywords). Query: PDB entry ID, PDB Classification, Molecule name, Molecule synonym, Organism, EC#, UniProt accession number, Ligand name, PDB CCD ID, KEGG Pathway ID, KEGG reaction ID, KEGG Compound ID, rs number, OMIM ID, . Examples: 1dgk, Transferase, Hexokinase, HK l, homo sapiens, 2.7.1.1, P19367, Alpha-D-Gulcose, GLC, rn00521, C00031. Enter some KEGG compound IDs (delimited by a space or a line break). Examples: C00008 C00092 C04006 C00363 C04767 C00002.

<META> KEYWORDS

1 variants

2 keywords

3 enrichment

4 nldb n

5 atural l

6 igand d

7 ata b

8 natural complex

9 analog complex

10 ab initio complex

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Natural Ligand DB | nldb.hgc.jp Reviews

https://nldb.hgc.jp

Perfect match (for non-ID keywords). Query: PDB entry ID, PDB Classification, Molecule name, Molecule synonym, Organism, EC#, UniProt accession number, Ligand name, PDB CCD ID, KEGG Pathway ID, KEGG reaction ID, KEGG Compound ID, rs number, OMIM ID, . Examples: 1dgk, Transferase, Hexokinase, HK l, homo sapiens, 2.7.1.1, P19367, Alpha-D-Gulcose, GLC, rn00521, C00031. Enter some KEGG compound IDs (delimited by a space or a line break). Examples: C00008 C00092 C04006 C00363 C04767 C00002.

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Natural Ligand DB

http://nldb.hgc.jp/nldb/about;jsessionid=CA6E1E5770368DEF89F6D10EE66D6FA2

NLDB produces three different types of data resources, natural. Furthermore, the database has a flexible search function, based on various types of relevant keywords, and an enrichment analysis function based on a set of KEGG compound IDs. Kawabata T. and Nakamura H., (2014), 3D flexible alignment using 2D maximum common substructure: dependence of prediction accuracy on target-reference chemical similarity, J.Chem.Infor.Model, vol.54, pp.1850-1868. VaProS, VAriation effect on PROtein Structure and funct...

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Natural Ligand DB

http://nldb.hgc.jp/nldb/help;jsessionid=CA6E1E5770368DEF89F6D10EE66D6FA2

NLDB provides a flexible keyword search function, enabling users to retrieve the structures of particular protein-ligand interactions in enzymatic reactions of interest. Various types of keywords are allowed in the search function, such as PDB entry ID. UniProt accession number,. And so on, as well as combinations of these keywords. According to the search keywords inputted in the search box of the NLDB top page, the following three results pages will be provided:. For example, Hexokinase, homo sapiens.

3

Natural Ligand DB

http://nldb.hgc.jp/nldb/top;jsessionid=CA6E1E5770368DEF89F6D10EE66D6FA2

Perfect match (for non-ID keywords). Query: PDB entry ID, PDB Classification, Molecule name, Molecule synonym, Organism, EC#, UniProt accession number, Ligand name, PDB CCD ID, KEGG Pathway ID, KEGG reaction ID, KEGG Compound ID, rs number, OMIM ID, . Examples: 1dgk, Transferase, Hexokinase, HK l, homo sapiens, 2.7.1.1, P19367, Alpha-D-Gulcose, GLC, rn00521, C00031. Enter some KEGG compound IDs (delimited by a space or a line break). Examples: C00008 C00092 C04006 C00363 C04767 C00002.

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Natural Ligand DB

Perfect match (for non-ID keywords). Query: PDB entry ID, PDB Classification, Molecule name, Molecule synonym, Organism, EC#, UniProt accession number, Ligand name, PDB CCD ID, KEGG Pathway ID, KEGG reaction ID, KEGG Compound ID, rs number, OMIM ID, . Examples: 1dgk, Transferase, Hexokinase, HK l, homo sapiens, 2.7.1.1, P19367, Alpha-D-Gulcose, GLC, rn00521, C00031. Enter some KEGG compound IDs (delimited by a space or a line break). Examples: C00008 C00092 C04006 C00363 C04767 C00002.

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