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Provided curated annotations in an environment for comparative analysis of genomes and biological subsystems, with an emphasis on the food-borne pathogens. As well as the STD pathogens. Notice to NMPDR Users. The NMPDR BRC contract ended in December 2009. At that time we ceased maintenance of the NMPDR web resource and data. The PATRIC. If you have any questions about this transition. Instream base pairs to display. Option on the Operon Search. Form indicates how many base pairs? Index of Search Tools.

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Provided curated annotations in an environment for comparative analysis of genomes and biological subsystems, with an emphasis on the food-borne pathogens. As well as the STD pathogens. Notice to NMPDR Users. The NMPDR BRC contract ended in December 2009. At that time we ceased maintenance of the NMPDR web resource and data. The PATRIC. If you have any questions about this transition. Instream base pairs to display. Option on the Operon Search. Form indicates how many base pairs? Index of Search Tools.

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2 campylobacter

3 listeria

4 staphylococcus

5 streptococcus

6 vibrio

7 chlamydiaceae

8 haemophilus

9 mycoplasma

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WebHome < Main < NMPDR | nmpdr.org Reviews

https://nmpdr.org

Provided curated annotations in an environment for comparative analysis of genomes and biological subsystems, with an emphasis on the food-borne pathogens. As well as the STD pathogens. Notice to NMPDR Users. The NMPDR BRC contract ended in December 2009. At that time we ceased maintenance of the NMPDR web resource and data. The PATRIC. If you have any questions about this transition. Instream base pairs to display. Option on the Operon Search. Form indicates how many base pairs? Index of Search Tools.

SUBDOMAINS

rast.nmpdr.org

RAST Server - RAST Annotation Server

The NMPDR, SEED-based, prokaryotic genome annotation service. For more information about The SEED please visit theSEED.org. RAST (Rapid Annotation using Subsystem Technology) is a fully-automated service for annotating complete or nearly complete bacterial and archaeal genomes. It provides high quality genome annotations for these genomes across the whole phylogenetic tree. We have a number of presentations and tutorials available:. The RAST/SEED Workshop presentations. The RAST batch submission interface.

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nmpdr.org

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Publications < Main < NMPDR

http://www.nmpdr.org/FIG/wiki/view.cgi/Main/Publications

The RAST Server: Rapid annotations using subsystems technology. The National Microbial Pathogen Database Resource (NMPDR): A genomics platform based on subsystem annotation. National Institute of Allergy and Infectious Diseases bioinformatics resource centers: New assets for pathogen informatics. Greene JM, Collins F, Lefkowitz EJ, Roos D, Scheuermann RH, Sobral B, Stevens R, White O, Di Francesco V. Infect Immun. 2007 Jul;75(7):3212-9. [Epub 2007 Apr 9]. Sorci L, Martynowski D, Rodionov DA, Eyobo Y, Zog...

2

Listeria < Main < NMPDR

http://www.nmpdr.org/FIG/wiki/view.cgi/Main/Listeria

Taxonomy: Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae;. I Taxonomy ID: 1639. Is a low G C, Gram-positive bacteria that is closely related to Bacillus, Clostridium, Enterococcus, Streptococcus, and Staphylococcus. B Lifecycle and Morphology. To contribute a blurb on lifecycle, serotypes or handling the organism in healthcare or laboratory facilities, please contact help@nmpdr.org. Your contribution will be credited with a byline. SEM image of Listeria in tissue by Elizabeth White, CDC. Ii Size...

3

Chlamydiaceae < Main < NMPDR

http://www.nmpdr.org/FIG/wiki/view.cgi/Main/Chlamydiaceae

Taxonomy: Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae;. I Taxonomy ID: 809. All Chlamydiae have a biphasic developmental life cycle that depends on obligately intracellular growth in eukaryotic host cells. Causes both ocular and genital infections. Chlamydia - Google News. Chlamydia, Gonorrhea and Syphilis Get New U.N. Health Advisories - U.S. News and World Report. Chlamydia, Gonorrhea and Syphilis Get New U.N. Health Advisories. US News and World Report. All 15 news articles ». And more ». Growin...

4

OrganismDataSummaries < Main < NMPDR

http://www.nmpdr.org/FIG/wiki/view.cgi/Main/OrganismDataSummaries

NMPDR Core Pathogens and Supporting Genomes. Bacterial pathogen and toxin threats to biodefense. All essentially complete, public genomes are available in NMPDR to support extensive comparative analysis. NMPDR core genomes are listed first, followed by 44 Archaea. Campylobacter jejuni RM1221 (195099.3). Campylobacter jejuni subsp. doylei 269.97 (360109.7). Campylobacter jejuni subsp. jejuni 260.94 (360108.3, 10 contigs). Campylobacter jejuni subsp. jejuni 81-176 (354242.8, 3 contigs). Chlamydophila cavia...

5

Ureaplasma < Main < NMPDR

http://www.nmpdr.org/FIG/wiki/view.cgi/Main/Ureaplasma

Taxonomy: Bacteria; Firmicutes; Mollicutes; Mycoplasmataceae;. I Taxonomy ID: 2129. Formerly consisted of 2 biovars. Biovar 1, which includes serovars 1, 3, 6, and 14 has been designated. While biovar 2 (serovars 1, 4, 5, and 7-13) has been designated. Urethritis - Google News. Urethritis (inflammation of the urethra) causes, signs, and treatments - Bel Marra Health. Urethritis (inflammation of the urethra) causes, signs, and treatments. Stifel Has 3 Top Stocks to Buy With 95% or More Upside Potential.

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egybio.net

Ramy K. Aziz

http://egybio.net/people/rka.html

Ramy Karam Aziz, PhD. Last updated 28 June 2016. University of Tennessee Health Science Center, Memphis, TN USA. PhD in Microbiology and Immunology ( Dissertation. Faculty of Pharmacy, Cairo University, Cairo Egypt. BSc Pharmacy and Pharmaceutical Sciences. Assistant Professor, Department of Microbiology and Immunology, Faculty of Pharmacy, Cairo University. Visiting Scientist, Systems Biology Research Group. University of California San Diego. La Jolla, CA, USA (since 2011). Microbial and phage genomics.

thefig.info

The FIG Story

http://www.thefig.info/History.html

FIG Fellows have known one another and influenced each other’s scientific views for over three decades: their relationships as friends, students, supervisors, and colleagues have matured into this unique fellowship we call FIG. Teaches programming to high-school student Bruce Parrello. DeKalb, IL). Parrello came to the attention of Overbeek as a result of a manuscript in mathematical logic he authored while in high school. During this time, they develop a relationship with. An exchange scientist from.

egybio.net

Ramy K. Aziz

http://egybio.net//people/rka.html

Ramy Karam Aziz, PhD. Last updated 28 June 2016. University of Tennessee Health Science Center, Memphis, TN USA. PhD in Microbiology and Immunology ( Dissertation. Faculty of Pharmacy, Cairo University, Cairo Egypt. BSc Pharmacy and Pharmaceutical Sciences. Assistant Professor, Department of Microbiology and Immunology, Faculty of Pharmacy, Cairo University. Visiting Scientist, Systems Biology Research Group. University of California San Diego. La Jolla, CA, USA (since 2011). Microbial and phage genomics.

biohealthbase.org

Resources | BioHealthBase.org

http://www.biohealthbase.org/resources

BioHealthBase Publications and Other Materials. A web based resource for studies on the Microsporidia. Gire C., Scheuermann R., Weiss L. Pre-publication abstract, presented at the June 2006 meeting of the International Society of Protistologists (International Workshop on Opportunistic Protists). Computational Genomics Conference 2006. Dallas Areas Bioinformatics and Computational Biology Workshop. 2006 American Society of Virologists Meeting. 2006 Keystone Symposium – Advances in Influenza Research.

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nmpdr.org

WebHome < Main < NMPDR

Provided curated annotations in an environment for comparative analysis of genomes and biological subsystems, with an emphasis on the food-borne pathogens. As well as the STD pathogens. Notice to NMPDR Users. The NMPDR BRC contract ended in December 2009. At that time we ceased maintenance of the NMPDR web resource and data. The PATRIC. If you have any questions about this transition. Instream base pairs to display. Option on the Operon Search. Form indicates how many base pairs? Index of Search Tools.

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NMPDSagenda - home

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