ogdraw.mpimp-golm.mpg.de
Welcome to OGDraw v1.2OGDRAW - Quickly draw high-quality graphical maps of organellar genomes (And other circular DNA molecules, if you like).
http://ogdraw.mpimp-golm.mpg.de/
OGDRAW - Quickly draw high-quality graphical maps of organellar genomes (And other circular DNA molecules, if you like).
http://ogdraw.mpimp-golm.mpg.de/
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Welcome to OGDraw v1.2 | ogdraw.mpimp-golm.mpg.de Reviews
https://ogdraw.mpimp-golm.mpg.de
OGDRAW - Quickly draw high-quality graphical maps of organellar genomes (And other circular DNA molecules, if you like).
ogdraw.mpimp-golm.mpg.de
OGDRAW v1.1
http://ogdraw.mpimp-golm.mpg.de/cgi-bin/ogdraw.pl
Upload a GenBank file. Or specify an accession number. A list of all published organelle genome sequences. Can be found here.). For a test drive simply. A thaliana chloroplast genome and then "Submit sequence"). Upload custom configuration file. For further information on how to create a custom configuration file,. Please read the corresponding FAQ section. You are free to specify any GenBank file or accession number. However, the program will offer adequate drawing options only for plastid and.
Welcome to OGDraw v1.2
http://ogdraw.mpimp-golm.mpg.de/index.shtml
OrganellarGenomeDRAW- a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets. Lohse, M., Drechsel, O., Kahlau, S. and Bock, R. Nucl. Acids Res. (2013). OrganellarGenomeDRAW (OGDRAW) - a tool for the easy generation of high-quality custom graphical maps of plastid and mitochondrial genomes. Lohse, M., Drechsel, O. and Bock, R. Curr. Genet. To ensure full functionality please enable JavaScript! Map transcript abundance on plastid genome.
OGDraw known issues
http://ogdraw.mpimp-golm.mpg.de/ssi_issues.shtml
These persisting problems / bugs / feature requests are on our to-do list and will be solved or implemented in the future. If you have a comment or wish to see another feature please tell us. We will include an option that will label all genes containing an intron with an asterisk (*) .
OGDraw FAQ
http://ogdraw.mpimp-golm.mpg.de/ssi_faqs.shtml
1 Why do I see a giant gene that extends across half of the map? 2 Some of the gene names are extremely long and overlap with the GC graph or the image border. How can I avoid this? 3 Some of the gene names are scrambled after activating the 'tidy-up' option. Why? 4 I need a different resolution of the final image. What can I do? 5 How can I import OGDRAW-generated maps into CorelDraw? 6 I would like to change certain names and/or edit features on the map. How can I do this? 8 How OGDraw finds operons?
OGDraw naming suggestions
http://ogdraw.mpimp-golm.mpg.de/ssi_naming.shtml
Nomenclature conventions for plastome-encoded genes. Similarly, we propose to use the nomenclature. SIZE IN SVEDBERG UNITS without the 'S'. To describe ribosomal RNA genes. Many of the deposited chloroplast genomes already follow these guidelines. In all other cases, the software will try to reformat the names to match the above format if the 'tidy-up' option is activated.
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Welcome to OGDraw v1.2
OrganellarGenomeDRAW- a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets. Lohse, M., Drechsel, O., Kahlau, S. and Bock, R. Nucl. Acids Res. (2013). OrganellarGenomeDRAW (OGDRAW) - a tool for the easy generation of high-quality custom graphical maps of plastid and mitochondrial genomes. Lohse, M., Drechsel, O. and Bock, R. Curr. Genet. To ensure full functionality please enable JavaScript! Map transcript abundance on plastid genome.
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