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The Chongle Pan Lab at ORNL/UTK – Integrated -omics, Systems biology, Bioinformatics, and High-performance computingIntegrated -omics, Systems biology, Bioinformatics, and High-performance computing
http://www.omicsbio.org/
Integrated -omics, Systems biology, Bioinformatics, and High-performance computing
http://www.omicsbio.org/
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The Chongle Pan Lab at ORNL/UTK – Integrated -omics, Systems biology, Bioinformatics, and High-performance computing | omicsbio.org Reviews
https://omicsbio.org
Integrated -omics, Systems biology, Bioinformatics, and High-performance computing
Sipros | Proteomics data analysis software
Proteomics data analysis software. Sipros is a database-searching algorithm for peptide and protein identification in shotgun proteomics. 1 Regular database searching. 2 Stable isotope probing. 3 Identification of post-translational modifications. 4 Identification of amino acid mutations. 1 Scalable to high-performance computing. 2 Full integration with ProRata for quantification. Proudly powered by WordPress.
Omega | Overlap-graph de novo Assembler for Metagenomics
Note: Omega V1.0.2 is ready! January 14, 2014. The first version of Omega (V1.0.2) has been released. Click the DOWNLOAD. Overlap-graph de novo Assembler for Metagenomics. Proudly powered by WordPress.
ORNL MIDAS
A Database-Searching Algorithm for Metabolite Identification in Metabolomics. MIDAS A Database-Searching Algorithm for Metabolite Identification in Metabolomics. A database searching approach can be used for metabolite identification in metabolomics by matching the measured tandem mass spectra against the predicted fragments of metabolites in a database. Here we present the MIDAS.
SIGMA | Strain-level Identification of Genomes from Metagenomic Analysis for Biosurveillance
August 29, 2014. Identification of microbes and accurate estimation of their relative abundance are crucial subjects in metagenomic analysis. Existing taxonomic classification methods are unsuitable for metagenomic biosurveillance due to the following three factors. First, reference genomes including complete genomes of pathogenic bacteria are required. Second, strain-level genome identification from the same species is essential. Third, statistical confidence evaluation of the metagenomi...Nalysis), a n...
ORNL UniFam
Pipeline to Annotate Proteins. UniFam Protein Annotation Pipeline. UniFam Protein Annotatoin Pipeline. A pipeline to annotate proteins with newly developed protein family database (UniFam) and to predict metabolic pathways for a genome is made available to users. UniFam. Is a new protein family database based on proteins in UniProt including SwissProt and Trembl. It annotates proteins on the full sequence level instead of on the domain level.
omicsbio.org
Protocol: how to develop modular and maintainable software in our lab - Omics Bio
http://www.omicsbio.org/2014/10/01/protocol-how-to-develop-modular-and-maintainable-software-in-our-lab
Publications led by our lab. Publications led by collaborators. Publications on Google Scholar. Protocol: how to develop modular and maintainable software in our lab. October 1, 2014. Recommended Group Practices for Software Development. Our group should follow a Unix development philosophy ( http:/ en.wikipedia.org/wiki/Unix philosophy. The recommended command calling a program should follow the format:. ProgramName -w WorkingDirectory -c ConfigurationFile -i InputFile -o OutputFile -h PrintHelp. H: to ...
Publications led by collaborators Archives - Omics Bio
http://www.omicsbio.org/category/publications/publications-led-by-collaborators
Publications led by our lab. Publications led by collaborators. Publications on Google Scholar. Category Archives: Publications led by collaborators. Publications in which we are co-authors. Publications led by collaborators. Elevated temperature alters proteomic responses of individual organisms within a biofilm community. July 23, 2014. Mosier, A. C., Zhou Li. Thomas, B. C., Hettich, R. L., Chongle Pan. Banfield, J. F. Doi:10.1038/ismej.2014.113 (2014). [ Link to Article. June 16, 2014. May 22, 2014.
metabolomics Archives - Omics Bio
http://www.omicsbio.org/tag/metabolomics
Publications led by our lab. Publications led by collaborators. Publications on Google Scholar. Protocol: how to extract metabolites from fungal and plant samples. October 6, 2014. For the step #6:. Single-use sterile and non-pyrogenic latex-free syringes, 0.01 1 ml Tuberkulin Omnifix-F (B.Braun Melsungen AG, cat. no. 9161406V). 1: Harvest cells and then rapidly freeze the cells in liquid nitrogen. Note: Take care that tissues stay well frozen during homogenization; discard any samples that start to thaw...
Sitemap - Omics Bio
http://www.omicsbio.org/sitemap
Publications led by our lab. Publications led by collaborators. Publications on Google Scholar. A list of our publications on scientist journals. More informal and timely communication of our work. Backgrounds and accomplishments of our lab members. Overview of our research projects and facilities. Algorithms and web services developed in our lab. Sigma: http:/ sigma.omicsbio.org. Omega: http:/ omega.omicsbio.org. UniFam: http:/ unifam.omicsbio.org. Sipros: http:/ sipros.omicsbio.org. October 9, 2014.
Protocol: how to extract metabolites from fungal and plant samples - Omics Bio
http://www.omicsbio.org/2014/10/06/protocol-extract-metabolites-fungal-plant-samples
Publications led by our lab. Publications led by collaborators. Publications on Google Scholar. Protocol: how to extract metabolites from fungal and plant samples. October 6, 2014. For the step #6:. Single-use sterile and non-pyrogenic latex-free syringes, 0.01 1 ml Tuberkulin Omnifix-F (B.Braun Melsungen AG, cat. no. 9161406V). 1: Harvest cells and then rapidly freeze the cells in liquid nitrogen. Note: Take care that tissues stay well frozen during homogenization; discard any samples that start to thaw...
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OMIC San Fernando
Jueves, 22 de abril de 2010. En 2009, recuperamos $518.000 para los consumidores. A través de audiencias de conciliación, se resolvieron 376 expedientes. Esta cifra representa un 87% del total de las causas iniciadas. La Oficina Municipal de Información al Consumidor (OMIC) funciona en San Fernando desde principios de 2006, con la tarea de ejercer el seguimiento de los precios acordados entre el gobierno y las grandes cadenas de supermercados instaladas en la ciudad. La oferta de créditos, el control de ...
SANTA POLA:Red OMIC
Qué es la OMIC. Servicios de la OMIC. Guía de preguntas frecuentes. Temás de interés para el consumidor. Destacados La información que no te puedes perder. Acrilamida: 10 consejos para reducir su consumo. Este compuesto orgánico se forma principalmente en alimentos ricos en hidratos de carbono, horneado y fritos. Este miércoles entra en vigor un paquete de medidas para que la industria la. 50 consejos de la OCU para ahorrar hasta 3.000 euros al año. El crédito al consumo supera al hipotecario. 2015 - Ser...
Welcome to Omics Australasia | Omics Australasia
Dr Chris Smith, The Naked Scientist. Perth City at Night. Western Australian Martime Museum. Welcome to Omics Australasia. Welcome to Omics Australasia. As the premier event for researchers, industry executives and key stakeholders involved in Omics research, OA aims to bring together a unique panel of Omics experts from around the globe to discuss research advances, innovations and challenges with a focus on emerging opportunities and technological development. The Symposium is an excellent opportunity ...
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The Chongle Pan Lab at ORNL/UTK – Integrated -omics, Systems biology, Bioinformatics, and High-performance computing
The Chongle Pan Lab at ORNL/UTK. Integrated -omics, Systems biology, Bioinformatics, and High-performance computing. Community proteogenomics reveals the systemic impact of phosphorus availability on microbial functions in tropical soil. Community proteogenomics reveals the systemic impact of phosphorus availability on microbial functions in tropical soil. February 16, 2018. Biomedical knowledge representation and reasoning. Biomedical knowledge representation and reasoning. December 3, 2017. Hypermutato...
Omics Center Graz - General Information
The Omics Center Graz bundles the expertise and existing infrastructure in genomics, transcriptomics, proteomics, and metabolomics/lipidomics, as well as bioinformatics and administration of research centers in Graz. The center builds upon successful scientific collaborations between three universities of Graz ( Medical University of Graz. And University of Technology of Graz. In the last years in large scale projects ( GENAU GOLD. 2014, as a BioTechMed. Medical University of Graz. Ph: 43 316 385-72962.
COS | Centre for Omic Sciences
Centre for Omic Sciences. Ir al contenido principal. Ir al contenido secundario. Services & Applications. Strategy and Experimental design support. Integrative Biological Models of Experimentation. Strategy and Experimental design support. Integrative Biological Models of Experimentation.
omicscience.com
Main Page - Bio.pe.kr
From Bio.pe.kr. Retrieved from " http:/ www.omicscloud.net/index.php/Main Page. Related Links [ Edit. This page was last modified on 23 March 2015, at 07:29. This page has been accessed 815,191 times. Content is available under BioLicense: the freest license. About Bio.pe.kr.
