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MicroEco

A Tool for the Analysis of Complex Microbial Communities. PhyloTemp is a tool which can be used in the R environment. To visualize and cluster multiple microbial community samples based upon composition (e.g. 16S rRNA gene library taxonomic assignment or OTU composition). It is a modification of existing R heatmap and heatmap.2 (gplots) functions adding a phylogenetic aspect, as well as numerous other enhancements. If you find PhyloTemp useful please cite:. Sunday, May 16, 2010.

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MicroEco | openbioinfo.org Reviews
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A Tool for the Analysis of Complex Microbial Communities. PhyloTemp is a tool which can be used in the R environment. To visualize and cluster multiple microbial community samples based upon composition (e.g. 16S rRNA gene library taxonomic assignment or OTU composition). It is a modification of existing R heatmap and heatmap.2 (gplots) functions adding a phylogenetic aspect, as well as numerous other enhancements. If you find PhyloTemp useful please cite:. Sunday, May 16, 2010.
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MicroEco | openbioinfo.org Reviews

https://openbioinfo.org

A Tool for the Analysis of Complex Microbial Communities. PhyloTemp is a tool which can be used in the R environment. To visualize and cluster multiple microbial community samples based upon composition (e.g. 16S rRNA gene library taxonomic assignment or OTU composition). It is a modification of existing R heatmap and heatmap.2 (gplots) functions adding a phylogenetic aspect, as well as numerous other enhancements. If you find PhyloTemp useful please cite:. Sunday, May 16, 2010.

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About Us

http://www.openbioinfo.org/id1.html

MicroEco was founded in 2005 with the early development of the PhyloTemp tool. The guiding principles are to produce open source software tools to aid effective visualization and analysis of the increasingly complex data produced by microbial and viral ecology research. Shawn Polson ( CV. Sara Polson ( CV.

2

MicroEco

http://www.openbioinfo.org/2010.05.01_arch.html

A Tool for the Analysis of Complex Microbial Communities. PhyloTemp is a tool which can be used in the R environment. To visualize and cluster multiple microbial community samples based upon composition (e.g. 16S rRNA gene library taxonomic assignment or OTU composition). It is a modification of existing R heatmap and heatmap.2 (gplots) functions adding a phylogenetic aspect, as well as numerous other enhancements. If you find PhyloTemp useful please cite:. Sunday, May 16, 2010.

3

MicroEco

http://www.openbioinfo.org/index.html

A Tool for the Analysis of Complex Microbial Communities. PhyloTemp is a tool which can be used in the R environment. To visualize and cluster multiple microbial community samples based upon composition (e.g. 16S rRNA gene library taxonomic assignment or OTU composition). It is a modification of existing R heatmap and heatmap.2 (gplots) functions adding a phylogenetic aspect, as well as numerous other enhancements. If you find PhyloTemp useful please cite:. Sunday, May 16, 2010.

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Download

http://www.openbioinfo.org/id11.html

Tools available for download:. PhyloTemp R function (0.5 beta). Scripts for PhyloTemp (coming soon). Bootstrapping wrapper for R DPCOA (ade4) function (coming soon). LibCompare R function (coming soon). Software available under GNU Public License.

5

Contact Us

http://www.openbioinfo.org/id7.html

For general information or comments:. For technical issues with PhyloTemp:.

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A Tool for the Analysis of Complex Microbial Communities. PhyloTemp is a tool which can be used in the R environment. To visualize and cluster multiple microbial community samples based upon composition (e.g. 16S rRNA gene library taxonomic assignment or OTU composition). It is a modification of existing R heatmap and heatmap.2 (gplots) functions adding a phylogenetic aspect, as well as numerous other enhancements. If you find PhyloTemp useful please cite:. Sunday, May 16, 2010.

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