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openmbir.org

MBIR Home

Is an open source project that develops model-based imaging algorithms for various applications. Model-based approaches to imaging combine the physics of data formation, the noise characteristics of the sensors and a probabilistic model for the object to formulate the image reconstruction problem. In several applications MBIR translates to minimizing a very high-dimensional cost-function which requires efficient algorithms. Our software is termed Tomography Environment for MBIR (TEMBIR).

http://www.openmbir.org/

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MBIR Home | openmbir.org Reviews
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Is an open source project that develops model-based imaging algorithms for various applications. Model-based approaches to imaging combine the physics of data formation, the noise characteristics of the sensors and a probabilistic model for the object to formulate the image reconstruction problem. In several applications MBIR translates to minimizing a very high-dimensional cost-function which requires efficient algorithms. Our software is termed Tomography Environment for MBIR (TEMBIR).
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1 mbir home
2 tembir haadf
3 tembir bf
4 model based image reconstruction
5 openmbir
6 tomography
7 mbir synchrotron
8 acknowledgement of support
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MBIR Home | openmbir.org Reviews

https://openmbir.org

Is an open source project that develops model-based imaging algorithms for various applications. Model-based approaches to imaging combine the physics of data formation, the noise characteristics of the sensors and a probabilistic model for the object to formulate the image reconstruction problem. In several applications MBIR translates to minimizing a very high-dimensional cost-function which requires efficient algorithms. Our software is termed Tomography Environment for MBIR (TEMBIR).

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openmbir.org openmbir.org
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HAADF-STEM Tomography

http://www.openmbir.org/styled/index.html

SV Venkatakrishnan, L.F. Drummy, M. Jackson, M. De Graef, J.P. Simmons, and C.A. Bouman, "A Model Based Iterative Reconstruction Algorithm for High Angle Annular Dark Field Scanning Transmission Electron Microscope (HAADF-STEM) Tomography,". IEEE Transactions on Image Processing. Vol 22, Issue 11 (Nov 2013). C Based Software (with GUI). Automatic initialization of parameters. Reconstruct the volume at various voxels sizes. Multi-threaded code using Intel TBB. Windows XP/Vista/7 64 bit.

2

TEMBIR-BF

http://www.openmbir.org/styled-2/index.html

SV Venkatakrishnan, L.F. Drummy, M. Jackson, M. De Graef, J.P. Simmons, and C.A. Bouman, "Model-Based Iterative Reconstruction for Bright-Field Electron Tomography" ,. Accepted IEEE Transactions on Image Processing/Computational Imaging. C Based Software (with GUI). Automatic initialization of parameters. Reconstruct the volume at various voxels sizes. Can be used for reconstructing amorphous as well as crystalline samples. Multi-threaded code using Intel TBB. Software Download (Version 2.35).

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Is an open source project that develops model-based imaging algorithms for various applications. Model-based approaches to imaging combine the physics of data formation, the noise characteristics of the sensors and a probabilistic model for the object to formulate the image reconstruction problem. In several applications MBIR translates to minimizing a very high-dimensional cost-function which requires efficient algorithms. Our software is termed Tomography Environment for MBIR (TEMBIR).

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