pages.genemania.org

About · GeneMANIA

GeneMANIA helps you predict the function of your favourite genes and gene sets. If members of your gene list make up a protein complex, GeneMANIA will return more potential members of the protein complex. If you enter a gene list, GeneMANIA will return connections between your genes, within the selected datasets. Learn more. GeneMANIA is also accessible via a Cytoscape app. Designed for power users. GeneMANIA is actively developed at the University of Toronto. In the labs of Gary Bader.

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About · GeneMANIA | pages.genemania.org Reviews

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GeneMANIA helps you predict the function of your favourite genes and gene sets. If members of your gene list make up a protein complex, GeneMANIA will return more potential members of the protein complex. If you enter a gene list, GeneMANIA will return connections between your genes, within the selected datasets. Learn more. GeneMANIA is also accessible via a Cytoscape app. Designed for power users. GeneMANIA is actively developed at the University of Toronto. In the labs of Gary Bader.

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6 cytoscape app

7 data archive

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About · GeneMANIA | pages.genemania.org Reviews

https://pages.genemania.org

GeneMANIA helps you predict the function of your favourite genes and gene sets. If members of your gene list make up a protein complex, GeneMANIA will return more potential members of the protein complex. If you enter a gene list, GeneMANIA will return connections between your genes, within the selected datasets. Learn more. GeneMANIA is also accessible via a Cytoscape app. Designed for power users. GeneMANIA is actively developed at the University of Toronto. In the labs of Gary Bader.

INTERNAL PAGES

pages.genemania.org

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People – GeneMANIA documentation

http://pages.genemania.org/people

The GeneMANIA team is based in the Donnelly Centre for Cellular and Biomolecular Research. Building at the University of Toronto. Canada’s leading research institution. Even faster gene predictions. GeneMANIA will be unavailable on the nights of Aug 18 and Aug 19. GeneMANIA now supports E. coli. Proudly powered by WordPress. Powered by TurnKey Linux.

2

Media – GeneMANIA documentation

http://pages.genemania.org/media

The University of Toronto Announces Free OpenHelix Tutorial and Training Materials for GeneMANIA, a Gene Function Prediction Tool. The creators of GeneMANIA have contracted with OpenHelix to provide comprehensive online training for the gene function prediction tool ( http:/ genemania.org. The new training initiatives include a free online tutorial suite on GeneMANIA. The online narrated tutorial ( http:/ www.openhelix.com/genemania. In addition to the tutorial, GeneMANIA users can also access useful tra...

3

Cytoscape app – GeneMANIA documentation

http://pages.genemania.org/plugin

The GeneMANIA Cytoscape app. Number of query genes is limited only by the amount of memory available. Powerful command line tools. To automate basic and advanced analysis not available via the website. Users can add their own organisms. GeneMANIA Cytoscape plugin: fast gene function predictions on the desktop. Montojo J, Zuberi K, Rodriguez H, Kazi F, Wright G, Donaldson SL, Morris Q, Bader GD (2010). Java 1.5 JVM (1.6 is required for Cytoscape 2.8 ). 263 , 2.7 , or 2.8 , 3.0. Make sure Cytoscape is open.

4

Help – GeneMANIA documentation

http://pages.genemania.org/help

Uploading your own network. Choosing an appropriate network weighting option. Gene Ontology (GO)-based weighting. GeneMANIA works best if most of the input genes are functionally related. If they are not, a disconnected network will result and the network weighting will not be optimal. It does not matter which function they are related by, as long as that function is captured somehow by some functional association networks in the GeneMANIA system. The GeneMANIA Cytoscape app. Networks names describe the ...

5

GeneMANIA data archive – GeneMANIA documentation

http://pages.genemania.org/data

GeneMANIA interaction networks are available for download in plain text format at http:/ genemania.org/data/. The data is organized into separate folders by release date under the “archive” folder, each named by the year, month, and day of release in the format “YYYY-MM-DD”. The most recent release is also available under the folder “current”. Each interacting pair of genes will be present exactly once in the file (symmetric interactions are not included) . Non-interacting genes are not present. ...File ...

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pages.genemania.org

About · GeneMANIA

GeneMANIA helps you predict the function of your favourite genes and gene sets. If members of your gene list make up a protein complex, GeneMANIA will return more potential members of the protein complex. If you enter a gene list, GeneMANIA will return connections between your genes, within the selected datasets. Learn more. GeneMANIA is also accessible via a Cytoscape app. Designed for power users. GeneMANIA is actively developed at the University of Toronto. In the labs of Gary Bader.

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