pathways.embl.de

iPath 3: interactive Pathways Explorer

Biosynthesis of secondary metabolites. Microbial metabolism in diverse environments. Interactive Pathways Explorer v3. Interactive Pathways Explorer (iPath) is a web-based tool for the visualization, analysis and customization of various pathway maps. IPath provides extensive map customization and data mapping capablities. Colors, width and opacity of any map element can be changed using various types of data (for example KEGG KOs, COGs or EC numbers). Our help pages. Yamada T et al.

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iPath 3: interactive Pathways Explorer | pathways.embl.de Reviews

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Biosynthesis of secondary metabolites. Microbial metabolism in diverse environments. Interactive Pathways Explorer v3. Interactive Pathways Explorer (iPath) is a web-based tool for the visualization, analysis and customization of various pathway maps. IPath provides extensive map customization and data mapping capablities. Colors, width and opacity of any map element can be changed using various types of data (for example KEGG KOs, COGs or EC numbers). Our help pages. Yamada T et al.

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2 metabolic pathways

3 biosynthesis of antibiotics

4 tools

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6 help pages

7 video tutorials

8 about and contact

9 available maps

10 metabolism

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iPath 3: interactive Pathways Explorer | pathways.embl.de Reviews

https://pathways.embl.de

Biosynthesis of secondary metabolites. Microbial metabolism in diverse environments. Interactive Pathways Explorer v3. Interactive Pathways Explorer (iPath) is a web-based tool for the visualization, analysis and customization of various pathway maps. IPath provides extensive map customization and data mapping capablities. Colors, width and opacity of any map element can be changed using various types of data (for example KEGG KOs, COGs or EC numbers). Our help pages. Yamada T et al.

INTERNAL PAGES

pathways.embl.de

1

iPath: Datasets

https://pathways.embl.de/data.html

This page contains various data dumps from iPath databases, which should give you better understanding of how various data is projected onto the maps. If you notice differences in how your data maps to different iPath versions, check the files below for possible clues, or contact us. Cog from string7 to ko20080319 filtered 005.txt.gz. Mapping of COGs to KOs. Annotation for KOs used in iPath 1. Annotation for KEGG modules used in iPath 1. COGmappings.v7.1.txt.gz. Og2ko filtered005.txt.gz. IDs in list 2 on...

2

iTuby

https://pathways.embl.de/iTuby

Interactive Pathways Explorer 2. Requires Adobe Flash Player version 12.0.0 or greater.

3

Mycoplasma map

https://pathways.embl.de/iMyco

Is powered by the interactive Pathways Explorer. Clicking on nodes or edges will display detailed information. This map is displayed using Flash, and your browser does not have a proper plugin installed. You can download and install the plugin from Adobe Flash download page. Send comments to Ivica Letunic.

4

iPath: Interactive Pathways Explorer

https://pathways.embl.de/iPath1

Welcome to the Interactive Pathways Explorer. This version of iPath is now outdated. Please visit http:/ pathways.embl.de. To access the latest version. Is a web-based tool for the visualization and analysis of the metabolic pathways. The underlying global pathways map is constructed using approximately 120 KEGG. Pathways, and gives an overview of the complete metabolism in biological systems. Nodes in the map correspond to various chemical compounds and edges represent series of enzymatic reactions.

5

iPath: Interactive Pathways Explorer v2

https://pathways.embl.de/index.html

Welcome to the Interactive Pathways Explorer. Interactive Pathways Explorer ( iPath. Is a web-based tool for the visualization, analysis and customization of the various pathways maps. Current version provides three different global overview maps:. Constructed using 146 KEGG pathways, and gives an overview of the complete metabolism in biological systems. 22 KEGG regulatory pathways. Biosynthesis of secondary metabolites:. Contains 58 KEGG pathways involved in biosynthesis of secondary metabolites. The d...

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dd-decaf.eu

DD-DeCaF

http://dd-decaf.eu/index.html

Navigation arrow drop down. Bioinformatics Services for Data-Driven Design of Cell Factories and Communities. 1st edition of the DD-DeCaF newsletter now available! February 28, 2017). The first edition of the DD-DeCaF is now available, in this issue it is presented an overview of the project and its resources and a summary including the publications generated in the year 1 of the project. Webcast DD-DeCaF platform adds an interactive pathway viewer (January 25, 2017). Huerta-Cepas, Jaime and Forslund, Kr...

hamamuralab.com

Hamamura Group | Resources

http://www.hamamuralab.com/pages/display/resources

Research Site Map and Data. IMG/M (Integrated Microbial Genomes with Microbiome Samples: JGI). 169; 2011 Dr. Natsuko Hamamura. 4 previous requests available. Restore to current request. To view Cookies, add CookieComponent to Controller. No active database connections. Core Processing (Derived from $ SERVER["REQUEST TIME"]). Raquo; Processing toolbar data. Raquo; Event: View.beforeRender. Raquo; Rendering APP/View/Pages/resources.ctp. Raquo; Event: View.afterRender. Raquo; Event: View.beforeLayout.

lifesciinformatics.blogspot.com

Asif M. Khan: A Practical Bioinformatician's Advance Toolkit

http://lifesciinformatics.blogspot.com/2007/12/practical-bioinformaticians-advance.html

Asif M. Khan. Life Science Informatics Resource Hub. A Practical Bioinformatician's Advance Toolkit. An integrated portal for diverse type of sophisticated bioinformatics analyses (highly recommended). Construct and analyze structural variants. Multiple sequence alignment program for the whole-genome human-mouse alignments. Prediction of Functional Effect of Human nsSNPs. Sorting Intolerant from Tolerant. Assigns Molecular Functional Effects of Non-Synonymous SNPs Based on Structure and Sequence Analysis.

letunic.com

Development

http://www.letunic.com/development.html

Bio = (a.z);. Bioinformatics development and consulting. ITOL: interactive Tree Of Life. Interactive Tree Of Life. Is an online tool for the display and manipulation of phylogenetic trees. It provides most of the features available in other tree viewers, and offers a novel circular tree layout, which makes it easy to visualize mid-sized tree (up to several thousand leaves). Trees can be exported to several graphical formats, both bitmap and vector based. Click the thumbnails for full size images. Various...

letunic.com

Publications

http://www.letunic.com/publications.html

Bio = (a.z);. Bioinformatics development and consulting. Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees. 2016 Apr 19. pii: gkw290. Interactive Tree Of Life ( http:/ itol.embl.de. The SIDER database of drugs and side effects. Kuhn M, Letunic I. Jensen LJ, Bork P. 2016 Jan 4;44(D1):D1075-9. doi: 10.1093/nar/gkv1075. The InterPro protein families database: the classification resource after 15 years. 2015 Jan; 43(Database issue). Includes a n...

csbg.cnb.csic.es

Tools for the functional interpretation of metabolomic experiments - Computational Systems Biology Group

http://csbg.cnb.csic.es/metab_rev

Tools for the functional interpretation of metabolomic experiments. Approaches (e.g genomics. Seek to massively characterizing the molecular repertories of living systems. Among them, metabolomics. Tries to determine the set of metabolites in a given biological system. As metabolomic techniques develop and allow characterizing larger sets of metabolites, researchers need automatic methods to interpret their experimental results. We can classify these tools in two groups:. More information and links.

bork.embl.de

Bork Group - Comparative Systems Analysis - Services

http://www.bork.embl.de/j/index.php/content/view/55/157

The services - resources and tools, developed by Bork Group, are mainly designed and maintained for research and academic purposes. Most of services are published and documented in one or more papers. Please refer to the corresponding publications. All our tools can be completely customized and integrated into your existing framework. This service is provided by the company biobyte solutions GmbH. Please visit their tools. Simple Modular Architecture Research Tool. Interactive Tree Of Life. A general gra...

biobyte.de

biobyte solutions GmbH: customised bioinformatics tools, services and consulting

http://www.biobyte.de/index.html

Customised bioinformatics tools and services. BIOINFORMATICS SERVICES / TOOLS / CONSULTING. Provides customised bioinformatics services and tools. From text mining to data management. First class custom software development, resource integration and biological data management. Unmatched metagenomics data processing and analysis. Tools used by scientists worldwide. Our tools can be fully customised and integrated into your existing infrastructure. As complex or simple as required. Customized solutions for...

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pathways.cz

Travel to the Czech Republic: Prague sightseeing tours & day trips, Prague accommodation, transfers from Prague

Guided Travel Throughout Central Europe, and More. We have been assisting individuals and small groups to realize their travel goals in Central Europe since 1994, offering an impressive variety of destinations, activities, lodging, and transportation according to your wishes. Please wander through and enjoy our site: trips described here may be booked as they appear, or used simply as an example of the many possibilities. Let us assist you to Experience the Mysteries In Prague and Well Beyond. Mikulov - ...

pathways.eb.co.uk

Britannica PATHWAYS: SCIENCE

Welcome to Pathways: Science. An online, inquiry-based exploration of misconceptions. Through interactive lessons, which are in line with the Curriculum, students will make predictions and investigate evidence to reach conclusions about tough topics. Bull; Subscription Form. Bull; Other Products. Bull; Legal Notices. Bull; Privacy Policy. 2018 Encyclopædia Britannica, Inc.

pathways.eb.com

Britannica PATHWAYS: SCIENCE

Welcome to Pathways: Science. An online, inquiry-based exploration of misconceptions. Through interactive lessons tied to middle school curriculum standards, students will make predictions and investigate evidence to reach conclusions about tough topics. Bull; Subscription Form. Bull; Other Products. Bull; Legal Notices. Bull; Privacy Policy. 2018 Encyclopædia Britannica, Inc.

pathways.ebonline.in

Britannica PATHWAYS: SCIENCE

Welcome to Pathways: Science. An online, inquiry-based exploration of misconceptions. Through interactive lessons tied to middle school curriculum standards, students will make predictions and investigate evidence to reach conclusions about tough topics. Bull; Subscription Form. Bull; Other Products. Bull; Legal Notices. Bull; Privacy Policy. 2017 Encyclopædia Britannica, Inc.

pathways.edu.pk

Pathways British School

pathways.embl.de

iPath 3: interactive Pathways Explorer

Biosynthesis of secondary metabolites. Microbial metabolism in diverse environments. Interactive Pathways Explorer v3. Interactive Pathways Explorer (iPath) is a web-based tool for the visualization, analysis and customization of various pathway maps. IPath provides extensive map customization and data mapping capablities. Colors, width and opacity of any map element can be changed using various types of data (for example KEGG KOs, COGs or EC numbers). Our help pages. Yamada T et al.

pathways.engineering.illinois.edu

Engineering Pathway at Illinois

For students who are interested in transferring to the College of Engineering at the University of Illinois at Urbana-Champaign, the Engineering Pathways program offers qualifying students guaranteed admission. Feb 4, 2015. Mar 14, 2015. December 4, 2014. C005, Grayslake campus. February 5, 2015. C005, Grayslake campus. November 6, 2014. February 26, 2015. Science Building, Room. Oakton, Des Plaines. Feb 12, 2015. Please select your school. Please select your school. Have at least one internship. Co-foun...

pathways.enverjusufovicracing.com.au

Enver Jusufovic Racing - Australian Horse Trainer

EJs dynamic late-season VOBIS surge. Enver Jusufovic has finished the 2013-14 season and started the new season with a surge of winners—four winners from his last six starters, and all collected Super VOBIS and VOBIS Gold bonuses. Exciting 3YO OMalley (by Street Boss) kicked off the hot run with a terrific 1000m win at Flemington on July 19—his second consecutive metropolitan win—that took his record to three wins and two seconds from only five starts. Importantly, she is proof that my patient style of t...

pathways.eu

Pathways

News & Events. Pathways to Power: The Political Representation of Citizens of Immigrant Origin in Seven European Democracies. Implemented by Carlos Vieira Reis. Follow us on Twitter.

pathways.gratefulness.org

Default Web Site Page

If you are the owner of this website, please contact your hosting provider: webmaster@pathways.gratefulness.org. It is possible you have reached this page because:. The IP address has changed. The IP address for this domain may have changed recently. Check your DNS settings to verify that the domain is set up correctly. It may take 8-24 hours for DNS changes to propagate. It may be possible to restore access to this site by following these instructions. For clearing your dns cache.

pathways.gseis.ucla.edu

Welcome! — PATHWAYS to Postsecondary Success

Only in current section. PATHWAYS to Postsecondary Success. Is a five-year set of mixed-methods studies focused on maximizing opportunities for low-income youth to earn higher education credentials. The project aims to. Advance research on poverty;. Produce useful tools that improve educational opportunities; and. Inform the U.S. policy agenda on the relationship between poverty and education. Of national datasets, a. Of California youth,. To track educational opportunities for low-income youth. How does...