patterngenomics.com patterngenomics.com

patterngenomics.com

Pattern Genomics

Pattern Genomics uses next-generation DNA sequencing and proprietary bioinformatics for rapid and robust in silico molecular diagnostic design.

http://www.patterngenomics.com/

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Pattern Genomics | patterngenomics.com Reviews
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Pattern Genomics uses next-generation DNA sequencing and proprietary bioinformatics for rapid and robust in silico molecular diagnostic design.
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Pattern Genomics | patterngenomics.com Reviews

https://patterngenomics.com

Pattern Genomics uses next-generation DNA sequencing and proprietary bioinformatics for rapid and robust in silico molecular diagnostic design.

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1

Learn About Pattern Genomics

http://patterngenomics.com/learn-about-pattern-genomics

Learn About Pattern Genomics. Founded in 2011, Pattern Genomics has developed a sophisticated bioinformatics platform called Daydreamer that seeks to answer a straightforward question: given a large collection of sequences of various subtypes, what are the differences between the subtypes, and how could one test for them with a molecular diagnostic? Use the links below to find out more about our technology. Learn more about Pattern Genomics’ technology and approach to primer and probe selection.

2

Pattern Genomics News

http://patterngenomics.com/category/news

Pattern Genomics and CDC Present Joint Research at ASM Conference. September 23, 2015. Pattern Genomics (Madison, CT) and the Centers for Disease Control and Prevention (CDC, Altanta, GA) will jointly present their research entitled "Development of a Subtyping Assay for Direct Detection and Targeted Sequencing of Shiga toxin-producing Escherichia coli (STEC) from Clinical Samples" at the 1st ASM Conference on Rapid Next-Generation Sequencing and Bioinformatic Pipelines for Enhanced [.]. October 6, 2014.

3

Our Advantages

http://patterngenomics.com/portfolio/advantages-of-the-pattern-genomics-process

Advantages of The Pattern Genomics Process. Task performed by experts with broadly unpredictable costs and timelines to a. Enabled by next-generation sequencing and our proprietary Daydreamer platform. Our process. Applies to any class of assay targets that can be isolated and sequenced, including viable, non-culturable organisms – metagenomic background matrices are readily accommodated,. Enables facile assay updates and refinements by incorporating novel strains via. Primer3 , OMP. Requires pre-selecte...

4

PG and CDC Collaborate on Shiga-toxin E. coli

http://patterngenomics.com/2014/05/19/pattern-genomics-and-cdc-to-develop-new-ways-to-identify-shiga-toxin-producing-e-coli

Pattern Genomics and CDC to Develop New Ways to Identify Shiga-toxin Producing E. coli. May 19, 2014. Pattern Genomics and the Centers for Disease Control and Prevention have launched a collaboration to investigate new molecular surveillance tools for identifying Shiga toxin-producing Escherichia coli. STEC) bacteria in clinical samples. Pattern Genomics will use its proprietary Daydreamer platform and CDC’s bacterial genomics data to identify sequence targets that are present in STEC but absent in r...

5

Case Studies

http://patterngenomics.com/studies

Serotype-correlated Markers for Salmonella enterica Serotype Typhimurium. August 13, 2014. In addition to reporting species, culture-independent detection methods ideally should report the subtype of a targeted pathogen. Serotyping is a commonly-used subtyping scheme. However, the genomic basis for serotype may involve many locii on multiple genes, making a direct PCR assay difficult to develop. While DNA sequencing may be useful to assess serotype from genomic… Read More. April 9, 2014. February 1, 2014.

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