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PDB Flex :: GodzikLab

The PDBFlex database explores the intrinsic flexibility of protein structures by analyzing structural variations between different depositions and chains in asymmetric unit of the same protein in PDB. It allows to easily identify regions and types of structural flexibility present in a protein of interest. Current PDB release used from Oct. 04th, 2016. Enter PDB&Chain ( 1a50A. Other services maintained by our group. JS library for visualizing biological sequences. View details ». View details ».

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PDB Flex :: GodzikLab | pdbflex.org Reviews

https://pdbflex.org

The PDBFlex database explores the intrinsic flexibility of protein structures by analyzing structural variations between different depositions and chains in asymmetric unit of the same protein in PDB. It allows to easily identify regions and types of structural flexibility present in a protein of interest. Current PDB release used from Oct. 04th, 2016. Enter PDB&Chain ( 1a50A. Other services maintained by our group. JS library for visualizing biological sequences. View details ». View details ».

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pdbflex.org pdbflex.org
1

PDB Flex :: GodzikLab

http://www.pdbflex.org/help.html

On the PDBFlex database you will be able to browse through a large number of flexibility clusters with many viewers and tools. The paper and this help provides you with all additional information about the tools. However, we provide specific, quick help references on the top right of each visualization box, available by clicking on the. PDBFlex has three different oportinities for you to browse through the data. And hit enter. You can load a example PDB by clicking on the 1a50A. Link on the start page.

2

PDB Flex :: GodzikLab

http://www.pdbflex.org/index.html

The PDBFlex database explores the intrinsic flexibility of protein structures by analyzing structural variations between different depositions and chains in asymmetric unit of the same protein in PDB. It allows to easily identify regions and types of structural flexibility present in a protein of interest. Current PDB release used : Jan 17th, 2017. Enter PDB&Chain ( 1a50A. Other scientific services by our group. JS library for visualizing biological sequences. View details ». View details ».

3

Flexible Structure Alignment :: GodzikLab

http://www.pdbflex.org/clusters.html

Browse all available clusters here. Sort them by size or maximum RMSD per cluster. You can also search for any PDB and chain (1a50A).

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Godzik Lab Website

http://bioinformatics.sanfordburnham.org/pages/servers.html

Bioinformatics and System Biology. BNAber: database of broadly neutralizing HIV antibodies. Our Institute is retiring the following domains in web and email:. Please replace them by sbpdiscovery.org. Bioinformatics Web Servers and Databases. Is a new, updated and maintained version of the F. Server is a pairwise flexible protein structure alignment server. See Bioinformatics, 2003, 19(Suppl 2):II246-II255. And Nucleic Acids Res. 2014 May 16. pii: gku394. Is a database that explores the intrinsic flexibil...

godziklab.org godziklab.org

Godzik Lab Website

http://www.godziklab.org/pages/people.html

Bioinformatics and System Biology. BNAber: database of broadly neutralizing HIV antibodies. Our Institute is retiring the following domains in web and email:. Please replace them by sbpdiscovery.org. People In Godzik Lab. Sorted by Last Name. Adam Godzik, Ph.D. Bioinformatics and Systems Biology. Professor, PI, Program Director. Tel: 858-646-3100 x 3168. Tel: 858-646-3100 ext 3790. Yuanyuan Chang, Ph.D. Tel: 858-646-3100 ext 4146. Piotr Cieplak, Ph.D. Research Ass. Professor. Tel: 858-646-3100 ext 3076.

bioinformatics.sanfordburnham.org bioinformatics.sanfordburnham.org

Godzik Lab Website

http://bioinformatics.sanfordburnham.org/pages/publication.html

Bioinformatics and System Biology. BNAber: database of broadly neutralizing HIV antibodies. Our Institute is retiring the following domains in web and email:. Please replace them by sbpdiscovery.org. Porta-Pardo E, Godzik A. Mutation drivers of immunological responses to cancer. Cancer Immunol Res. 2016 Jul 11. PubMed. Thomas Hrabe, Lukasz Jaroszewski and Adam Godzik. Revealing aperiodic aspects of solenoid proteins from sequence information. Bioinformatics. 2016 Jun 9. PubMed. AIDA: ab initio domain ass...

bioinformatics.sanfordburnham.org bioinformatics.sanfordburnham.org

Godzik Lab Website

http://bioinformatics.sanfordburnham.org/pages/index.html

Bioinformatics and System Biology. BNAber: database of broadly neutralizing HIV antibodies. Our Institute is retiring the following domains in web and email:. Please replace them by sbpdiscovery.org. Physicists, biologists and computer scientists meet together to understand proteins. If you want to know more about what (and how and why) we do, read on. See our new paper. Porta-Pardo E, Godzik A., Mutation drivers of immunological responses to cancer. Cancer Immunol Res. 2016 Jul 11. A user-driven, intera...

godziklab.org godziklab.org

Godzik Lab Website

http://www.godziklab.org/pages/servers.html

Bioinformatics and System Biology. BNAber: database of broadly neutralizing HIV antibodies. Our Institute is retiring the following domains in web and email:. Please replace them by sbpdiscovery.org. Bioinformatics Web Servers and Databases. Is a new, updated and maintained version of the F. Server is a pairwise flexible protein structure alignment server. See Bioinformatics, 2003, 19(Suppl 2):II246-II255. And Nucleic Acids Res. 2014 May 16. pii: gku394. Is a database that explores the intrinsic flexibil...

godziklab.org godziklab.org

Godzik Lab Website

http://www.godziklab.org/pages/index.html

Bioinformatics and System Biology. BNAber: database of broadly neutralizing HIV antibodies. Our Institute is retiring the following domains in web and email:. Please replace them by sbpdiscovery.org. Physicists, biologists and computer scientists meet together to understand proteins. If you want to know more about what (and how and why) we do, read on. See our new paper. Porta-Pardo E, Godzik A., Mutation drivers of immunological responses to cancer. Cancer Immunol Res. 2016 Jul 11. A user-driven, intera...

godziklab.org godziklab.org

Godzik Lab Website

http://www.godziklab.org/pages/publication.html

Bioinformatics and System Biology. BNAber: database of broadly neutralizing HIV antibodies. Our Institute is retiring the following domains in web and email:. Please replace them by sbpdiscovery.org. Porta-Pardo E, Godzik A. Mutation drivers of immunological responses to cancer. Cancer Immunol Res. 2016 Jul 11. PubMed. Thomas Hrabe, Lukasz Jaroszewski and Adam Godzik. Revealing aperiodic aspects of solenoid proteins from sequence information. Bioinformatics. 2016 Jun 9. PubMed. AIDA: ab initio domain ass...

bioinformatics.burnham.org bioinformatics.burnham.org

Godzik Lab Website

http://bioinformatics.burnham.org/pages/people.html

Bioinformatics and System Biology. BNAber: database of broadly neutralizing HIV antibodies. Our Institute is retiring the following domains in web and email:. Please replace them by sbpdiscovery.org. People In Godzik Lab. Sorted by Last Name. Adam Godzik, Ph.D. Bioinformatics and Systems Biology. Professor, PI, Program Director. Tel: 858-646-3100 x 3168. Tel: 858-646-3100 ext 3790. Yuanyuan Chang, Ph.D. Tel: 858-646-3100 ext 4146. Piotr Cieplak, Ph.D. Research Ass. Professor. Tel: 858-646-3100 ext 3076.

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PDB Flex :: GodzikLab

The PDBFlex database explores the intrinsic flexibility of protein structures by analyzing structural variations between different depositions and chains in asymmetric unit of the same protein in PDB. It allows to easily identify regions and types of structural flexibility present in a protein of interest. Current PDB release used from Oct. 04th, 2016. Enter PDB&Chain ( 1a50A. Other services maintained by our group. JS library for visualizing biological sequences. View details ». View details ».

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