pandora.cs.huji.ac.il
Pandora
http://pandora.cs.huji.ac.il/index.php
Protein ANnotation Diagram ORiented Analysis. The Sudarsky Center for Computational Biology. The Hebrew University of Jerusalem. Welcome to Pandora version 4.2! In order to study of proteins you can choose from the top menubar:. Study a set of proteins that share an annotation. Study your own set of proteins including quantitative data. Blast a sequence and view the results in PANDORA. Match list of mass spectrometry-derived (MS) peptides to the corresponding proteins and analyze these proteins in PANDORA.
pandora.cs.huji.ac.il
Pandora
http://pandora.cs.huji.ac.il/about.php
Protein ANnotation Diagram ORiented Analysis. The Sudarsky Center for Computational Biology. The Hebrew University of Jerusalem. Pandora version 4.2. Department of Biological Chemistry, Institute of Life Sciences. Hebrew University, Jerusalem, Israel. School of Computer Science and Enigineering. Hebrew University, Jerusalem, Israel. You can contact us through this mail form. Kaplan N, Vaaknin A and Linial M. (2003). PANDORA: keyword-based analysis of protein sets by integration of annotation sources.
erc.endocrinology-journals.org
ERC -- Instructions for Authors
http://erc.endocrinology-journals.org/site/misc/For-Authors.xhtml
Journal of Endocrinology (JOE). Journal of Molecular Endocrinology (JME). Skip to main page content. Open Access and archiving in online repositories. Letters to the Editor. Gene and protein nomenclature. Declaration of interest, Funding and Acknowledgements. Society for Endocrinology Journal Awards. The established global forum for high-quality research in hormones and cancer. All authors must abide by the standards outlined in the journal’s ethical guidelines. BioScientifica is a member of CrossRef.
genome.ucsc.edu
UCSC Genome Browser Blog
http://genome.ucsc.edu/blog
UCSC Genome Browser Blog. GTEx Resources in the Browser. Have you been wondering when we’ll get some of that next-gen gene expression in human tissues up as tracks in the browser? The GNF Atlas microarray tracks are. 2004 Yes, we do have RNA-seq from ENCODE cell lines, but you can get only so far with cell lines (are they even human? Well, wait no longer! Once we learned what the GTEx folks are up to RNA-seq and genotyping of samples from 53 tissues in many hundreds of donors we just had to get on board!
garfield.dobzhanskycenter.org
UCSC Genome Browser: News Archives
http://garfield.dobzhanskycenter.org/goldenPath/newsarch.html
Cat Felis catus 6.2/felCat5. Reset All User Settings. 3 November 2015 — We are pleased to announce new quick links for the Browser's top menu bar! The "Genomes" menu now features direct links to jump to browsing the human (hg38 and hg19) and mouse (mm10 and mm9) assemblies! These links also preserve location information, such as a favorite gene's location, allowing users to quickly compare available annotation tracks between two assemblies. Key to view the entire list of shortcuts. Happy browsing! We wou...
omicsdi.org
OmicSDI Databases
http://www.omicsdi.org/databases
Is a centralized, standards compliant, public data repository for proteomics data, including protein and peptide identifications, post-translational modifications and supporting spectral evidence. Allows you to explore datasets from genomic studies, provided by a range of data providers. Access to datasets must be approved by the specified Data Access Committee (DAC). Is a database for Metabolomics experiments and derived information. ArrayExpress Archive of Functional Genomics Data stores data from high...
bioinfoworld.wordpress.com
Links | Bioinfoworld - SJ
https://bioinfoworld.wordpress.com/bioinformatics-links
Bioinfoworld – SJ. Bioinformatics, a science that underpins the multi-omics technologies enabling information processing, data analysis and software for integrative biological research across life sciences. This list is by no means comprehensive, but just the most important ones that have proved to be handy for my work…. The Human Protein Atlas (HPA). BASE BioArray Software Environment. R Project http:/ www.r-project.org/. To be continued…. Leave a Reply Cancel reply. Enter your comment here.
pandora.cs.huji.ac.il
Pandora
http://pandora.cs.huji.ac.il/userset.php
Protein ANnotation Diagram ORiented Analysis. The Sudarsky Center for Computational Biology. The Hebrew University of Jerusalem. Study your own set of proteins ( see help. For further information on file formats etc, see the help sections on input methods. And on user properties. Or you may also load sample data:. Simple list of Protein IDs. Protein IDs with user properties (CSV). Protein IDs with user properties (tab delimited). SwissProt/TrEMBL protein accession numbers. GenBank gene accession numbers.
