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SciLifeLab, Royal Institute of Technology (KTH)
Lukas Kall
Box●●●031
So●●na , Stockholm, SE-17165
Sweden
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Center for Biomembrane Research
Lukas Kall
Arrhenius●●●●●●●●●iet, C465
Stockho●●●●●●●ersitet
Sto●●●olm , Stockholm, SE-10691
Sweden
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Center for Biomembrane Research
Lukas Kall
Arrhenius●●●●●●●●●iet, C465
Stockho●●●●●●●ersitet
Sto●●●olm , Stockholm, SE-10691
Sweden
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This website is for sale! per-colator.com is your first and best source for all of the information you’re looking for. From general topics to more of what you would expect to find here, per-colator.com has it all. We hope you find what you are searching for!
qvality - Nonparametric estimation of posterior error probabilities
http://noble.gs.washington.edu/proj/qvality
Qvality - Nonparametric estimation of posterior error probabilities. Qvality estimates q-values and posterior error probabilities directly from score distributions. The method can be accessed via a web interface. Or downloaded as stand-alone executable. As a part of the percolator package. If you use this software in your research, please cite. Lukas Käll, John D. Storey and William Stafford Noble. Qvality: Nonparametric estimation of q values and posterior error probabilities". 16):i42-i48, August 2008.
Publications | Käll Research Lab
http://kaell.org/publications
Statistical Biotechnology at the School of Biotechnology, KTH. Analysis of Data fram High-throughput Molecular Biology Experiments. An updated list of publications is also available from Google Scholar. And Olga VitekComputational mass spectrometry-based proteomics. Viktor Granholm, William S Noble and Lukas Käll. Samples of Known Protein Content to Assess the Statistical Calibration of Scores Assigned to Peptide-Spectrum Matches in Shotgun Proteomics. Journal of Proteome Research. 673: 53-62, 2010.
Lukas Käll | Käll Research Lab
http://kaell.org/lukas
Statistical Biotechnology at the School of Biotechnology, KTH. Analysis of Data fram High-throughput Molecular Biology Experiments. Science for Life Laboratory, G6772 (6th floor of gamma-building). Science for Life Labratory. Swedish e-Science Research Centre. Royal Institute of Technology. School of Biotechnology, Box 1031. 171 65 Solna, Sweden.
Fido: MS/MS Protein ID Software
http://noble.gs.washington.edu/proj/fido
Fido: Protein Delivery Dog. This is a guide to downloading and using Fido, a method for protein identification in MS/MS proteomics. Think of it like a protein delivery dog: you bring it the scored matches between peptides and spectra, and it fetches a list of proteins ranked by posterior probability by doing clever tricks. Note: The version of Fido distributed here is no longer maintained. Fido has now been integrated into Percolator, which is distributed as stand-alone software. How to Cite Fido. Is the...
Semi-supervised learning for peptide identification fromshotgun proteomics datasets
http://noble.gs.washington.edu/proj/percolator
Semi-supervised learning for peptide identification from shotgun proteomics datasets. Jesse D. Canterbury. And Michael J. MacCoss. 4:923 - 925, November 2007. Shotgun proteomics uses liquid chromatography-tandem mass spectrometry to identify proteins in complex biological samples. We describe an algorithm, called Percolator, for improving the rate of peptide identifications from a collection of tandem mass spectra. Percolator uses semi-supervised machine learning to discriminate between correct a...
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per-colator.com - This website is for sale! - per-colator Resources and Information.
Semi-supervised learning for peptide identification from shotgun proteomics datasets. Download this project as a .zip file. Download this project as a tar.gz file. This repository holds the source code for percolator and format converters software packages; a software for postprocessing of shotgun proteomics data. Of the software can be found at in wiki format on the GitHub site, together with the source code. We keep an e-mail list percolator-user@googlegroups.com where new releases are announced.
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I love Autumn, Tulips, Blue, Audi R8 and Music. I love life w/o alcohol and drugs. I love coffee and chocolates. I love deep conversations. I love mosh pits. I love chaos once in a while. And I'll probably love you. But I hate whiners. Follow me on Twitter. Monday, January 16, 2017 @ 10:48 AM. You know those specific times you keep thinking back to? I have very few of those. And those few are usually the times that keep me questioning myself, wondering what if something else happened. The crossroads.
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