phaser.cimr.cam.ac.uk

Phaserwiki

Phaser is a program for phasing macromolecular crystal structures with maximum likelihood methods. It has been developed by Randy Read's group. At the Cambridge Institute for Medical Research. CIMR) in the University of Cambridge. And is available through the Phenix. To navigate through the extensive documentation for Phaser. This PhaserWiki supersedes the obsolete Phaser homepage. Which now redirects to this wiki. A copy of the obsolete Phaser homepage can be found here. Read TNCS/anisotropy binary file...

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Phaser is a program for phasing macromolecular crystal structures with maximum likelihood methods. It has been developed by Randy Read's group. At the Cambridge Institute for Medical Research. CIMR) in the University of Cambridge. And is available through the Phenix. To navigate through the extensive documentation for Phaser. This PhaserWiki supersedes the obsolete Phaser homepage. Which now redirects to this wiki. A copy of the obsolete Phaser homepage can be found here. Read TNCS/anisotropy binary file...

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1 Phaser Crystallographic Software

2 Developers

3 Phaser-2.5.6: Manual

4 Phaser-2.6.0: Manual

5

6 coupons

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phaser crystallographic software,from phaserwiki,jump to navigation,and ccp4,software suites,use the sidebar,currently supported releases,documentation manual,changelog highlights,bugfixes,solution history formatting,support for unicode,referencing phaser

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Phaserwiki | phaser.cimr.cam.ac.uk Reviews

https://phaser.cimr.cam.ac.uk

Phaser is a program for phasing macromolecular crystal structures with maximum likelihood methods. It has been developed by Randy Read's group. At the Cambridge Institute for Medical Research. CIMR) in the University of Cambridge. And is available through the Phenix. To navigate through the extensive documentation for Phaser. This PhaserWiki supersedes the obsolete Phaser homepage. Which now redirects to this wiki. A copy of the obsolete Phaser homepage can be found here. Read TNCS/anisotropy binary file...

INTERNAL PAGES

phaser.cimr.cam.ac.uk

1

Developers - Phaserwiki

http://www.phaser.cimr.cam.ac.uk/index.php/Developers

Professor Randy J. Read. Retrieved from " http:/ www.phaser.cimr.cam.ac.uk/index.php? This page was last modified on 13 January 2015, at 11:51. This page has been accessed 11,704 times.

2

SVN Repository - Phaserwiki

http://www.phaser.cimr.cam.ac.uk/index.php/SVN_Repository

Phaser code is open source. Code development is managed by subversion. If you are developing a pipeline using Phaser, please contact us for svn access so that we can work with you to add features and fix bugs. Note the University of Cambridge's Licences for Phaser. If you want the latest version of Phaser, then you don't need svn access. You can download recent nightly builds of Phenix, which always contain the latest version of Phaser that has passed regression tests. View the Phaser SVN repository.

3

Python Interface - Phaserwiki

http://www.phaser.cimr.cam.ac.uk/index.php/Python_Interface

Input-Objects, Run-Jobs, and Results-Objects. Input-Object set- and add-Functions. As an alternative to keyword input, Phaser can be called directly from a python script. This is the way Phaser is called in Phenix and we encourage developers of other automation pipelines to use the python scripting too. In order to call Phaser in python you will need to have Phaser installed from source. Input-Objects, Run-Jobs, and Results-Objects. I = InputMR AUTO(). R = runMR AUTO(i). I = InputMR FRF(). The syntax of ...

4

Molecular Replacement - Phaserwiki

http://www.phaser.cimr.cam.ac.uk/index.php/Molecular_Replacement

Should Phaser Solve It? What Resolution of Data Should be Used? Has Phaser Solved It? What to do in Difficult Cases. How to Define Data. How to Define Models. Building an Ensemble from Coordinates. Building an Ensemble from Electron Density. How to Define Composition. Composition by Solvent Content. Composition by Number of Residues in ASU. Composition by Molecular Weight. Composition by Percentage Scattering. How to Define Solutions. How to Select Peaks. How to Control Output. MR using keyword input.

5

Publications - Phaserwiki

http://www.phaser.cimr.cam.ac.uk/index.php/Publications

Phaser crystallographic software J Appl Cryst. McCoy AJ, Grosse-Kunstleve RW, Adams PD, Winn MD, Storoni LC, Read RJ. J Appl. Cryst. (2007). 40, 658-674. Using SAD data in Phaser Acta Cryst D. Read RJ, McCoy AJ. Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):338-344. Experimental phasing: best practice and pitfalls Acta Cryst D. McCoy AJ, Read RJ. Acta Cryst. (2010) D66, 458-469. An introduction to molecular replacement Acta Cryst D. Evans P, McCoy A. Acta Cryst. (2007). D63, 32-41. Improvement o...

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bournvalley.wordpress.com

Its a funny old game… | Dshelleyic's Blog

https://bournvalley.wordpress.com/2014/10/08/its-a-funny-old-game

One mans Archaeological Investigations in SW Cambs. Its a funny old game…. You go out to the same fields…. and according to the research there is nothing there….and to be honest you find a load of tat…day after day…week after week and then…these:. For the uninitiated left to right:. Saxon Frisian Type D Sceat minted somewhere around 700AD – Probably a Flemish import. Weight 1.03g. EMC2014.0276. Hentry III 1207-1272 (Continental Forgery of a Type 5 Long Cross Penny minted somewhere between 1250-1278/9) .

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Phaser is a program for phasing macromolecular crystal structures with maximum likelihood methods. It has been developed by Randy Read's group. At the Cambridge Institute for Medical Research. CIMR) in the University of Cambridge. And is available through the Phenix. To navigate through the extensive documentation for Phaser. This PhaserWiki supersedes the obsolete Phaser homepage. Which now redirects to this wiki. A copy of the obsolete Phaser homepage can be found here. Read TNCS/anisotropy binary file...

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