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Phenote: A Phenotype Annotation Tool Using Ontologies

Phenote, a phenotype annotation tool using ontologies.

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Phenote: A Phenotype Annotation Tool Using Ontologies | phenote.org Reviews
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Phenote, a phenotype annotation tool using ontologies.
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Phenote: A Phenotype Annotation Tool Using Ontologies | phenote.org Reviews

https://phenote.org

Phenote, a phenotype annotation tool using ontologies.

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Launch of i-mouse.org. In collaboration with CASIMIR partners BSRC Fleming's BioIT Unit is enhancing MRB, which will ultimately become i-mouse.org. BioIT is collaborating with GSF's IT dept. to install MausDB at BSRC Fleming. BioIT personnel will be actively involved in MausDB's development. Launch of i-mouse.org. BioIT Unit's spin off project MRB. Mouse Resource Browser), which was later renamed to DBoDB. DATABASE of DATABASES) will eventually become CASIMIR's i-mouse. The domain i-mouse.org. Is a compr...

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Plant Ontology and Gramene's Gene Annotation Workshop. Plant Biology 2010 LINK. Saturday July 31, 8:00 am - 12:00 pm. Room 512 a,b,e,f. Palais des congrès (the Montrèal convention centre). July 31, 2010. 8:00 - 8.10 am - Workshop goals and introduction [Pankaj Jaiswal] Media:Workshop introduction-1.pdf. 810 - 8.30 am - What is annotation and why we need it. [Pankaj Jaiswal] Media:Why we need annotations ASPB2010 jaiswal.ppt. 830 - 8.50*am - TAIR. By Kate Dreher Media:TAIR ASPB2010 dreher.ppt. In addition...

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Source code and support. Reporting Bugs and Feature Requests. Creating a term filter. Locating the Phenex settings folder. Creating, opening, and saving data files. Entering polymorphic or uncertain state values. Collaboration via file change detection and autosave. Ontology Request Broker (ORB). Removing Corrupted Ontology Files. Format standard for evolutionary data. Phenex builds on Phenote. From the OBO project. Jim Balhoff is the lead developer of Phenex. See the Phenex release history. Balhoff JP, ...

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Work Package 2: Phenotyping. We will conduct phenotyping in a three-tiered approach in order to create a comprehensive and data-rich annotation of the mutants and utilise the specialist expertise of the European zebrafish research community:. Initial phenotyping for morphology and behaviour at day 5 will be carried out by the laboratories that generate the mutants (mainly by GRL, UK). Work Package Leader: CNRS). Software and the PATO. Ontology. Within 6 months of the phenotyping they will submitted t...

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Phenote: A Phenotype Annotation Tool Using Ontologies

Get the source code. Ontology Lookup Service (OLS). Bug reports / feature requests. Phenote is both a complete piece of software and a software toolkit designed to facilitate the annotation of biological phenotypes using ontologies. Annotations recorded by Phenote are based on the EQ model. For representing phenotypes, combining entities from any ontology with qualities (such as PATO). Type-ahead-suggest (autocompletion) for terms within ontologies. Use of any OBO-format ontology (or OWL- OBO converted).

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