phytophthora-id.org

Phytophthora-ID | Welcome

ID includes over a hundred species and is regularly updated. Easy analysis with graphics. ID uses microsatellite data, calculates Bruvo's distance of the query and plots minimum spanning networks. And distance trees with bootstrap support. Using an R interface. ID uses the information of the nDNA region of the internal trascribed spacer (ITS). And the mtDNA cox spacer region. The current implementation of. ID (version 2.0). Is completely revised to be faster and more stable. Follow us on Twitter.

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ID includes over a hundred species and is regularly updated. Easy analysis with graphics. ID uses microsatellite data, calculates Bruvo's distance of the query and plots minimum spanning networks. And distance trees with bootstrap support. Using an R interface. ID uses the information of the nDNA region of the internal trascribed spacer (ITS). And the mtDNA cox spacer region. The current implementation of. ID (version 2.0). Is completely revised to be faster and more stable. Follow us on Twitter.

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1 phytophthora id

2 sequence id

3 genotype id

4 species identification

5 phytophthora

6 common molecular markers

7 lsaquo;

8 rsaquo;

9 welcome

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Phytophthora-ID | Welcome | phytophthora-id.org Reviews

https://phytophthora-id.org

ID includes over a hundred species and is regularly updated. Easy analysis with graphics. ID uses microsatellite data, calculates Bruvo's distance of the query and plots minimum spanning networks. And distance trees with bootstrap support. Using an R interface. ID uses the information of the nDNA region of the internal trascribed spacer (ITS). And the mtDNA cox spacer region. The current implementation of. ID (version 2.0). Is completely revised to be faster and more stable. Follow us on Twitter.

LINKS TO THIS WEBSITE

grunwaldlab.cgrb.oregonstate.edu

Getting ready | Grünwald Lab

http://grunwaldlab.cgrb.oregonstate.edu/poppr-r-package-population-genetics/getting-ready

News coverage Origin of Phytophthora infestans paper. Zhian Kamvar featured on OSU Stories. Interview with graduate student Javier Tabima. Links for prospective graduate students, undergrads and visiting scientists. On Tue, 2013-10-08 13:23. If you have never used the computing and programming language R this page is for you. To get you going you need to first install R, a graphics user environment and the R packages needed to. Donwload and install R. After installing R we suggest you install Rstudio next.

grunwaldlab.cgrb.oregonstate.edu

Publications: Journal articles | Grünwald Lab

http://grunwaldlab.cgrb.oregonstate.edu/lab-biblio

News coverage Origin of Phytophthora infestans paper. Zhian Kamvar featured on OSU Stories. Interview with graduate student Javier Tabima. Links for prospective graduate students, undergrads and visiting scientists. Knaus, BJ , JF Tabima, CE Davis, HS Judelson, and NJ Grünwald. Genomic Analyses Of Dominant Us Clonal Lineages Of Phytophthora Infestans Reveals A Shared Common Ancestry For Clonal Lineages Us11 And Us18 And A Lack Of Recently Shared Ancestry Among All Other Us Lineages. Grünwald, Niklaus J, ...

grunwaldlab.cgrb.oregonstate.edu

News | Grünwald Lab

http://grunwaldlab.cgrb.oregonstate.edu/external-notebook

News coverage Origin of Phytophthora infestans paper. Zhian Kamvar featured on OSU Stories. Interview with graduate student Javier Tabima. Links for prospective graduate students, undergrads and visiting scientists. The external notebooks are tools and notes from the laboratory to the public. Create a new external notebook page. Downloads of our R packages to date. On Wed, 2016-05-25 15:24. It is nice to see all the CRAN package downloads from the lab:. Read more about Downloads of our R packages to date.

shell.cgrb.oregonstate.edu

Welcome to the CGRB Computational Infrastructure | CGRB Bioinformatics Site | Oregon State University

https://shell.cgrb.oregonstate.edu/home

Welcome to the CGRB Computational Infrastructure. 4000 AMD and Intel processors. 3500TB shared disk space. 10G main network connection. 40G backbone network connection. Secure, climate controlled. Assembling the Fungal Tree of Life. 2016 Oregon State University.

grunwaldlab.cgrb.oregonstate.edu

Resources | Grünwald Lab

http://grunwaldlab.cgrb.oregonstate.edu/resources

News coverage Origin of Phytophthora infestans paper. Zhian Kamvar featured on OSU Stories. Interview with graduate student Javier Tabima. Links for prospective graduate students, undergrads and visiting scientists. Links from our lab. Links for interested graduate students. In Department of Botany and Plant Pathology, Oregon State University. Molecular and Cellular Biology Graduate program. Links to our favorite institutions. Department of Botany and Plant Pathology,. USDA Agricultural Research Service.

grunwaldlab.cgrb.oregonstate.edu

Poppr: An R package for population genetics | Grünwald Lab

http://grunwaldlab.cgrb.oregonstate.edu/poppr-r-package-population-genetics

News coverage Origin of Phytophthora infestans paper. Zhian Kamvar featured on OSU Stories. Interview with graduate student Javier Tabima. Links for prospective graduate students, undergrads and visiting scientists. Poppr: An R package for population genetics. Is an R package useful in analysis of population genetic data. Introduces core functions for analysis of populations with mixed modes of reproduction typically observed for microbial populations including a blend of asexual and sexual reproduction.

grunwaldlab.cgrb.oregonstate.edu

Acknowledgements | Grünwald Lab

http://grunwaldlab.cgrb.oregonstate.edu/acknowledgements

News coverage Origin of Phytophthora infestans paper. Zhian Kamvar featured on OSU Stories. Interview with graduate student Javier Tabima. Links for prospective graduate students, undergrads and visiting scientists. We thank the following sources for major support of our research:. USDA Agricultural Research Service. Horticultural Crops Research Laboratory. Floriculture Nursery Research Initiative. Northwest Nursery Crops Research Center. Department of Botany and Plant Pathology.

grunwaldlab.cgrb.oregonstate.edu

User account | Grünwald Lab

http://grunwaldlab.cgrb.oregonstate.edu/user

News coverage Origin of Phytophthora infestans paper. Zhian Kamvar featured on OSU Stories. Interview with graduate student Javier Tabima. Links for prospective graduate students, undergrads and visiting scientists. Log in (active tab). Enter your Grünwald Lab username. Enter the password that accompanies your username. Horticultural Crops Research Laboratory, USDA ARS. Department of Botany and Plant Pathology, Oregon State University. 3420 NW Orchard Ave., Corvallis, OR 97330.

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Phytophthora-ID | Welcome

ID includes over a hundred species and is regularly updated. Easy analysis with graphics. ID uses microsatellite data, calculates Bruvo's distance of the query and plots minimum spanning networks. And distance trees with bootstrap support. Using an R interface. ID uses the information of the nDNA region of the internal trascribed spacer (ITS). And the mtDNA cox spacer region. The current implementation of. ID (version 2.0). Is completely revised to be faster and more stable. Follow us on Twitter.

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