polyploidy.biosci.utexas.edu

cottongenomics.biosci.utexas.edu

Project Participants - NSF Cotton Fiber Genomics Project - The Chen Lab at the University of Texas at Austin

http://cottongenomics.biosci.utexas.edu/participants.php

Skip to main navigation. Skip to first column. Skip to second column. Plant Genome Outreach Portal. Raquo; Project » Participants. Z Jeffrey Chen (PI). Nichols An (Undergraduate, Biology). Steven Hyon (Undergraduate, Biology). Section of Molecular Cell and Developmental Biology, Center for Computational Biology and Bioinformatics, and Institute for Cellular and Molecular Biology, University of Texas at Austin. John Rich Tuttle (Postdoc). Dorarean Ford (MS student). Amanda Hulse (PhD student).

cottongenomics.biosci.utexas.edu

Arabidopsis - NSF Cotton Fiber Genomics Project - The Chen Lab at the University of Texas at Austin

http://cottongenomics.biosci.utexas.edu/project/arabidopsisTrichome.php

Skip to main navigation. Skip to first column. Skip to second column. Plant Genome Outreach Portal. Raquo; Project » Arabidopsis Trichome. Cotton seed hair development share many similarities with. Leaf trichome development [8], which is mediated by a “trichome activation complex”. Leaf trichome initiation in. Some MYB factors such as AtMYB5 and AtMYB23 have minor effects on trichome initiation but regulate mucilage biosynthesis and seed coat development [9]. Moreover, trichome genes such as. Mutants [5]...

cottongenomics.biosci.utexas.edu

Cotton - NSF Cotton Fiber Genomics Project - The Chen Lab at the University of Texas at Austin

http://cottongenomics.biosci.utexas.edu/project/cotton.php

Skip to main navigation. Skip to first column. Skip to second column. Plant Genome Outreach Portal. Raquo; Project » Cotton. Cotton is the world’s most important renewable textile fiber and a significant oilseed crop [9]. Cotton fiber is widely used for apparel, home furnishings, and other diverse industrial products. World consumption of cotton fiber is 115-million bales or 27-million metric tons per year (National Cotton Council, http:/ www.cotton.org/. Includes 45 diploid (2. 26) and five tetraploid (2.

cottongenomics.biosci.utexas.edu

Project Participants - NSF Cotton Fiber Genomics Project - The Chen Lab at the University of Texas at Austin

http://cottongenomics.biosci.utexas.edu//participants.php

Skip to main navigation. Skip to first column. Skip to second column. Plant Genome Outreach Portal. Raquo; Project » Participants. Z Jeffrey Chen (PI). Nichols An (Undergraduate, Biology). Steven Hyon (Undergraduate, Biology). Section of Molecular Cell and Developmental Biology, Center for Computational Biology and Bioinformatics, and Institute for Cellular and Molecular Biology, University of Texas at Austin. John Rich Tuttle (Postdoc). Dorarean Ford (MS student). Amanda Hulse (PhD student).

cottongenomics.biosci.utexas.edu

Project Objectives - NSF Cotton Fiber Genomics Project - The Chen Lab at the University of Texas at Austin

http://cottongenomics.biosci.utexas.edu/project/objectives.php

Skip to main navigation. Skip to first column. Skip to second column. Plant Genome Outreach Portal. Raquo; Project » Project Objectives. Comparatively sequence transcriptomes in targeted stages of fiber development in. Test functions of the genes associated with fiber cell initiation and cell wall thickening. Develop a sequence-based BAC physical map in allotetraploid cotton (. L) using the restriction site-associated DNA (RAD) technology coupled with ultra-deep sequencing. April 20, 2015.

cottongenomics.biosci.utexas.edu

Project Objectives - NSF Cotton Fiber Genomics Project - The Chen Lab at the University of Texas at Austin

http://cottongenomics.biosci.utexas.edu/project/data.php

Skip to main navigation. Skip to first column. Skip to second column. Plant Genome Outreach Portal. Genome-wide analysis of small RNAs in cotton fibers PubMed. Transcriptome analyses of fiber development using the cotton 25-k oligo microarray PubMed. Proteomic divergecne in auto- and allopolyploids and their progenitors. PubMed. Transcriptome assembly of A- and D-genome progenitors of allotetraploid cotton. PubMed. A draft sequence of an allotetraploid cotton genome (. L acc TM-1). Pubmed. April 20, 2015.

cottongenomics.biosci.utexas.edu

News - NSF Cotton Fiber Genomics Project - The Chen Lab at the University of Texas at Austin

http://cottongenomics.biosci.utexas.edu/outreach/Education-Outreach.php

Skip to main navigation. Skip to first column. Skip to second column. Plant Genome Outreach Portal. Raquo; Education and Outreach. We will interact directly with the science teachers at the grade 7-12 level and help them incorporate Plant Genomics and Biotechnology into part of their curricula. Due to the magnitude of needs, we will further leverage our resources by continuing to work with recent USDA-ARS K-12 outreach efforts in Stoneville, MS. At Stoneville, MS and the Chen lab. April 20, 2015. In Cary...

cottongenomics.biosci.utexas.edu

News - NSF Cotton Fiber Genomics Project - The Chen Lab at the University of Texas at Austin

http://cottongenomics.biosci.utexas.edu/news.php

Skip to main navigation. Skip to first column. Skip to second column. Plant Genome Outreach Portal. April 20, 2015. A University of Texas at Austin scientist, working with an international research team, has developed the most precise sequence map. Yet of U.S. cotton and will soon create an even more detailed map for navigating the complex cotton genome. Full Story. The research in the USA team is supported by NSF. October 24, 2011. The project meeting was held at Cotton Inc. October 11, 2010. Co-PI: Dav...

cottongenomics.biosci.utexas.edu

Project Progress - NSF Cotton Fiber Genomics Project - The Chen Lab at the University of Texas at Austin

http://cottongenomics.biosci.utexas.edu/project/progress.php

Skip to main navigation. Skip to first column. Skip to second column. Plant Genome Outreach Portal. Raquo; Project » Project Progress. Cotton ESTs during early stages of fiber development. Approximately 35,000 high-quality ESTs (1/3 more than proposed) were developed from cotton (Gossypium hirsutum L. Cv TM-1) ovules and fiber cell initials, which were periodically updated in Cotton Gene Index (from CGI7 to CGI9) via a continuous collaboration with Dr.Chris Town at JCVI. Cotton Oligo DNA microarrays.