PROCARB.ORG

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PROCARB is an open access database comprising three independently working components:-. Module- It consists of 3D structures of protein-carbohydrate complexes taken from PDB. ( more. It consists of manually developed 3D models of N-Linked and O-Linked glycoproteins. Of unknown three-dimensional structures. ( more. It consists of a webserver to predict carbohydrate-binding sites using single-sequences or evolutionary information (PSSM). ( more. Enter PDB code :. You are visitor no.

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PROCARB HOME | procarb.org Reviews

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PROCARB is an open access database comprising three independently working components:-. Module- It consists of 3D structures of protein-carbohydrate complexes taken from PDB. ( more. It consists of manually developed 3D models of N-Linked and O-Linked glycoproteins. Of unknown three-dimensional structures. ( more. It consists of a webserver to predict carbohydrate-binding sites using single-sequences or evolutionary information (PSSM). ( more. Enter PDB code :. You are visitor no.

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PROCARB HOME | procarb.org Reviews

https://procarb.org

PROCARB is an open access database comprising three independently working components:-. Module- It consists of 3D structures of protein-carbohydrate complexes taken from PDB. ( more. It consists of manually developed 3D models of N-Linked and O-Linked glycoproteins. Of unknown three-dimensional structures. ( more. It consists of a webserver to predict carbohydrate-binding sites using single-sequences or evolutionary information (PSSM). ( more. Enter PDB code :. You are visitor no.

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procarb.org

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PROCARB HELP

http://www.procarb.org/procarbdb/cbs-pred-help.html

CBS-Pred prediction module consists of webservers to predict carbohydrate-binding sites using single sequences (CBS-SS). Or server generated evolutionary information in the form of PSSM (CBS-PSSM). CBS-Pred is an implementation of our earlier algorithm [ Malik and Ahmad, 2007. CBS-SS works in the following steps:. 1 Representation of each residue by 20 bit binary vector (all units are zero except one which represents its identity). 3 Compute amino-acid composition of protein and its length (21 units).

2

PROCARB SEARCH

http://www.procarb.org/procarbdb/keyword.html

Please search by one of the following methods. Eg, Plasminogen activator inhibitor 1. Eg, Homo sapiens or Human.

3

PROCARB STATISTICS

http://www.procarb.org/procarbdb/statistics.html

Total number of protein-carbohydrate complexes in PROCARB database = 604. Total number of modeled glycoproteins = 46. Total number of Unique carbohydrate ligands = 100.

4

HOMOLOGY MODELS HELP

http://www.procarb.org/procarbdb/models-help.html

Homology Models is a web resource for the 3D-structures of N- and O-Linked Glycoproteins, based on homology modeling. All these models were automatically generated by using 3DJIGSAW. Proteins for Homology Modeling were selected from Swissprot and O-glycbase databases. Selected glycoprotein sequences having atleast one experimentally verified glycosylation site were used as an input for the web-server 3DJIGSAW.

5

PROCARB HELP

http://www.procarb.org/procarbdb/procarb-help.html

The PROCARB database contains a collection of experimentally determined 3D structures of diverse types of protein-carbohydrate complexes. PROCARB core module is developed by systematicall locating protein-carbohydrate complexers in PDB. And manual verification of existence and identification of carbohydrate ligand.

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PROCARB is an open access database comprising three independently working components:-. Module- It consists of 3D structures of protein-carbohydrate complexes taken from PDB. ( more. It consists of manually developed 3D models of N-Linked and O-Linked glycoproteins. Of unknown three-dimensional structures. ( more. It consists of a webserver to predict carbohydrate-binding sites using single-sequences or evolutionary information (PSSM). ( more. Enter PDB code :. You are visitor no.

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