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Puneet Wadhwa's BIOINFORMATICS BLOG

Puneet Wadhwa's BIOINFORMATICS BLOG. Friday, March 24, 2006. Extracting ORF (CDS portion) from Sequence using Bioperl. I have been recently wrestling with creation of an ORF Database from Refseq Human Sequences, by extracting out the CDS portion of the sequence from the Genbank record. I needed this database for my project since we were analyzing our proprietary Incyte Gene Collection (IGC) for exact matches to Refseq sequences over the ORF (CDS) region. ORF DATABASE BUILDER UTILITY - Puneet Wadhwa #.

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Puneet Wadhwa's BIOINFORMATICS BLOG | puneetwadhwa.blogspot.com Reviews
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Puneet Wadhwa's BIOINFORMATICS BLOG. Friday, March 24, 2006. Extracting ORF (CDS portion) from Sequence using Bioperl. I have been recently wrestling with creation of an ORF Database from Refseq Human Sequences, by extracting out the CDS portion of the sequence from the Genbank record. I needed this database for my project since we were analyzing our proprietary Incyte Gene Collection (IGC) for exact matches to Refseq sequences over the ORF (CDS) region. ORF DATABASE BUILDER UTILITY - Puneet Wadhwa #.
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Puneet Wadhwa's BIOINFORMATICS BLOG | puneetwadhwa.blogspot.com Reviews

https://puneetwadhwa.blogspot.com

Puneet Wadhwa's BIOINFORMATICS BLOG. Friday, March 24, 2006. Extracting ORF (CDS portion) from Sequence using Bioperl. I have been recently wrestling with creation of an ORF Database from Refseq Human Sequences, by extracting out the CDS portion of the sequence from the Genbank record. I needed this database for my project since we were analyzing our proprietary Incyte Gene Collection (IGC) for exact matches to Refseq sequences over the ORF (CDS) region. ORF DATABASE BUILDER UTILITY - Puneet Wadhwa #.

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Puneet Wadhwa's BIOINFORMATICS BLOG: Sybase ADO.NET (Internal Error 30002) FIX

http://puneetwadhwa.blogspot.com/2006/01/sybase-adonet-internal-error-30002-fix.html

Puneet Wadhwa's BIOINFORMATICS BLOG. Friday, January 27, 2006. Sybase ADO.NET (Internal Error 30002) FIX. I opened up a Tech support case with Sybase as my company has their support subscription, and they advised us to upgrade the .NET PC Client to the latest EBF (ebf13008). This magically solved all these internal error problems. I hope some of you who may be facing these errors might get help. Posted by Puneet Wadhwa at 4:02 PM. Where can i get the ebf13008. I look forward to receving your reply,.

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Puneet Wadhwa's BIOINFORMATICS BLOG: January 2006

http://puneetwadhwa.blogspot.com/2006_01_01_archive.html

Puneet Wadhwa's BIOINFORMATICS BLOG. Friday, January 27, 2006. Sybase ADO.NET (Internal Error 30002) FIX. I opened up a Tech support case with Sybase as my company has their support subscription, and they advised us to upgrade the .NET PC Client to the latest EBF (ebf13008). This magically solved all these internal error problems. I hope some of you who may be facing these errors might get help. Posted by Puneet Wadhwa at 4:02 PM. Hi There, A warm welcome to you and thanks for visiting my blog! An introd...

3

Puneet Wadhwa's BIOINFORMATICS BLOG: Waking a sleeping giant: annotating the Incyte Gene Collection (IGC)

http://puneetwadhwa.blogspot.com/2006/03/waking-sleeping-giant-annotating.html

Puneet Wadhwa's BIOINFORMATICS BLOG. Thursday, March 02, 2006. Waking a sleeping giant: annotating the Incyte Gene Collection (IGC). Following is an article about my project which appeared on my company website's blog. We have got some great results from mining the IGC collection, and I am very very excited to share them with you. Genomics Mammalian Resources cDNAs Incyte Gene Collection and clicking on the data file icon under the ordering information for IHS1380. Posted by Puneet Wadhwa at 1:25 PM.

4

Puneet Wadhwa's BIOINFORMATICS BLOG: Effect of BLAST Low complexity filter on BLAST Results

http://puneetwadhwa.blogspot.com/2005/11/effect-of-blast-low-complexity-filter.html

Puneet Wadhwa's BIOINFORMATICS BLOG. Thursday, November 03, 2005. Effect of BLAST Low complexity filter on BLAST Results. This post is regarding one of my recent experiences with BLAST. I was trying to blast a big fasta file consisting of sequences over 4000 base pairs in length, and had the low complexity filter turned on (which is always ON by default). I hope someone facing the same problem would benefit from this post :). Posted by Puneet Wadhwa at 1:55 PM. Huntsville, Alabama, United States. Creatin...

5

Puneet Wadhwa's BIOINFORMATICS BLOG: An introduction to Data Mining

http://puneetwadhwa.blogspot.com/2005/11/introduction-to-data-mining.html

Puneet Wadhwa's BIOINFORMATICS BLOG. Monday, November 21, 2005. An introduction to Data Mining. This post is regarding one of the most exciting fields of research in Computer Science and it is opening plethora of opportunities for scientists and researchers especially in the field of Bioinformatics. Look forward to some more information on Data mining coming soon. Posted by Puneet Wadhwa at 5:53 PM. Hi There, A warm welcome to you and thanks for visiting my blog! Huntsville, Alabama, United States.

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JSwingPad Text Editor  JSwingPad is a simple MS

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Puneet Wadhwa's BIOINFORMATICS BLOG

Puneet Wadhwa's BIOINFORMATICS BLOG. Friday, March 24, 2006. Extracting ORF (CDS portion) from Sequence using Bioperl. I have been recently wrestling with creation of an ORF Database from Refseq Human Sequences, by extracting out the CDS portion of the sequence from the Genbank record. I needed this database for my project since we were analyzing our proprietary Incyte Gene Collection (IGC) for exact matches to Refseq sequences over the ORF (CDS) region. ORF DATABASE BUILDER UTILITY - Puneet Wadhwa #.

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