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R in Ecology and Evolution

Sunday, August 28, 2011. Comparing two regression slopes by means of an ANCOVA. For this example we want to determine how body size (snout-vent length) relates to pelvic canal width in both male and female alligators (data from Handbook of Biological Statistics. Slopes should be tested first, by testing for the interaction between the covariate and the factor. If slopes are significantly different between groups, then testing for different intercepts is somewhat inconsequential since it is very likel...

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Sunday, August 28, 2011. Comparing two regression slopes by means of an ANCOVA. For this example we want to determine how body size (snout-vent length) relates to pelvic canal width in both male and female alligators (data from Handbook of Biological Statistics. Slopes should be tested first, by testing for the interaction between the covariate and the factor. If slopes are significantly different between groups, then testing for different intercepts is somewhat inconsequential since it is very likel...

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1 ancova

2 interpretation

3 performing an ancova

4 snout

5 and pelvic

6 and aov

7 and mod2

8 with the anova

9 the anova

10 advanced

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ancova,interpretation,performing an ancova,snout,and pelvic,and aov,and mod2,with the anova,the anova,advanced,conclusion,posted by campitor,36 comments,labels linear model,larea log area,lsp log species,and log sp,command,summary mod1,call,residuals

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R in Ecology and Evolution | r-eco-evo.blogspot.com Reviews

https://r-eco-evo.blogspot.com

Sunday, August 28, 2011. Comparing two regression slopes by means of an ANCOVA. For this example we want to determine how body size (snout-vent length) relates to pelvic canal width in both male and female alligators (data from Handbook of Biological Statistics. Slopes should be tested first, by testing for the interaction between the covariate and the factor. If slopes are significantly different between groups, then testing for different intercepts is somewhat inconsequential since it is very likel...

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r-eco-evo.blogspot.com

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R in Ecology and Evolution: 11/01/2008 - 12/01/2008

http://r-eco-evo.blogspot.com/2008_11_01_archive.html

Saturday, November 22, 2008. Spatial Statistics. Part I. Spatial Statistics. Part I. Spatial statistics are becoming an important tool for population ecologists. These techniques allow researchers to answer questions regarding the spatial arrangements of individuals within a population and the causal factors that may be influencing spatial distributions. I will detail some basic spatial statistics using the spatstat. Gives the positions of 3605 trees of the species Beilschmiedia pendula. The previous res...

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R in Ecology and Evolution: Mantel Partial Regression

http://r-eco-evo.blogspot.com/2006/09/mantel-partial-regression.html

Friday, September 29, 2006. To perform a partial mantel regression on three different distance matrices: library(vegan). Mantel.partial (xdis, ydis, zdis,. Method = "pearson",. Subscribe to: Post Comments (Atom). R in Ecology and Evolution. This blog will be used as a repository of R code used in biology and evolution. Additionally, it is a place where I can practice writing in English. Simple template. Template images by Storman.

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R in Ecology and Evolution: 08/01/2011 - 09/01/2011

http://r-eco-evo.blogspot.com/2011_08_01_archive.html

Sunday, August 28, 2011. Comparing two regression slopes by means of an ANCOVA. For this example we want to determine how body size (snout-vent length) relates to pelvic canal width in both male and female alligators (data from Handbook of Biological Statistics. Slopes should be tested first, by testing for the interaction between the covariate and the factor. If slopes are significantly different between groups, then testing for different intercepts is somewhat inconsequential since it is very likel...

4

R in Ecology and Evolution: Neighbor Joining Tree with Ape

http://r-eco-evo.blogspot.com/2007/09/neighbor-joining-tree-with-ape.html

Saturday, September 15, 2007. Neighbor Joining Tree with Ape. Today I used R to create a neighbor joining phenogram, using the ape. Library. The phenogram will be used to visualize a species genetic differences between six different locations in Costa Rica. Genetic distances were calculated from microsatellite data using GenAlEx ( GenAlEx. Because I haven't figured out how to calculate Nei's genetic dissimilarities with R. This is the procedure I used:. Also provides commands designed to calculate distan...

5

R in Ecology and Evolution: Confidence Intervals for Regression plot

http://r-eco-evo.blogspot.com/2011/01/confidence-intervals-for-regression.html

Sunday, January 16, 2011. Confidence Intervals for Regression plot. I was recently confronted with the problem of plotting 95% confidence intervals on a regression line. I originally thought this would be a straight forward process in R, but soon came to realize there are some intricacies that need to be tackled before completing a presentable plot. Area - c(153750,15860,5800,5545,11970,2000,100). Species - c(36,34,33,33,21,12,3). New vectors with the log-transformed values. Mod1 - lm(lsp larea). Larea&...

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R in Ecology and Evolution

Sunday, August 28, 2011. Comparing two regression slopes by means of an ANCOVA. For this example we want to determine how body size (snout-vent length) relates to pelvic canal width in both male and female alligators (data from Handbook of Biological Statistics. Slopes should be tested first, by testing for the interaction between the covariate and the factor. If slopes are significantly different between groups, then testing for different intercepts is somewhat inconsequential since it is very likel...

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