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RCI: prediction of protein flexibility using Random Coil Index.

Side-chain RCI webserver predicts protein side-chain mobility by calculating the Side-Chain Random Coil Index from side-chain chemical shifts and predicting per-residue RMSD of NMR and MD ensembles as well as fractional accessible surface area of protein residues from the Random Coil Index. You can also download a Python stand-alone side-chain RCI program for Linux here. Main-chain RCI web server can be accessed here. Select the format of input file:. BMRB NMR-STAR 2.1 (Example). This page has been viewed.

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RCI: prediction of protein flexibility using Random Coil Index.

For main-chain chemical shifts. RCI webserver predicts protein flexibility by calculating the Random Coil Index from backbone chemical shifts (Cα, CO, Cβ, N, Hα, NH) and estimating values of model-free order parameters as well as per-residue RMSF of NMR and MD ensembles from the Random Coil Index. Mark V. Berjanskii, David S. Wishart (2005) A Simple Method To Predict Protein Flexibility Using Secondary Chemical Shifts. Journal of the American Chemical Society, 127 (43), 14970 -14971. 1) Random coil values.

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Random Colin

Theology, Biblical Studies, Philosophy and whatever other nonsense that's on my mind. Now in Blogger Platform. Saturday, September 26, 2009. Posted by Colin Toffelmire. Links to this post. Thursday, September 24, 2009. The Bible isnt a bible. A while ago Julia O'Brien had a post. I have heard it said that all biblical passages fall into two categories.  They are all either 1) promises, or 2) instructions.  Wrong.  Are there promises in the Bible? 160; Sure.  Are there instructions in the Bible? The use o...

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Random Colin | Biblical Studies, Theology, and Whatever Else

Biblical Studies, Theology, and Whatever Else. Life Among the Dutch…. September 27, 2012. It was in late 2008 or early 2009, I can’t remember which, that I first found myself staring with some confusion at a church directory containing a truly ridiculous number of entries under V and Z. Also, there were no Toews. Nor Thiessens. Nor Klassens, Peters, nor Enns (not even Ens! When attending in person it was not simply the names that were astounding, it was the dizzying. I saw people who truly believed that ...

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December 15, 2016. December 15, 2016. Every Soul Needs Acceptance. Continue reading →. April 2, 2016. Continue reading →. March 8, 2016. March 15, 2016. Continue reading →. February 10, 2016. February 10, 2016. Surviving without JAVA.OOPS [Blog]. Continue reading →. February 3, 2016. February 4, 2016. Let’s talk Mediation [Blog]. Continue reading →. January 30, 2016. February 3, 2016. My Princess Diary…[Blog]. Continue reading →. January 19, 2016. January 29, 2016. Light, Camera, Action…. [Blog].

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