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NAR WebServer Issue Publication - mtDNA-Server. Providing Hadoop as a Service is the main goal of Cloudgene, as described in one of my previous blog entries. Since Cloudgene is only the platform, useful use cases need to be implemented and integrated in Cloudgene. Here I want to introduce our newest service called mtDNA-Server. Which have been published in the NAR WebServer Issue 2016. NAR WebServer Issue Publication - HaploGrep2. Hadoop Services for Everyone. Setting up a HTTPS Restlet Webserver.

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NAR WebServer Issue Publication - mtDNA-Server. Providing Hadoop as a Service is the main goal of Cloudgene, as described in one of my previous blog entries. Since Cloudgene is only the platform, useful use cases need to be implemented and integrated in Cloudgene. Here I want to introduce our newest service called mtDNA-Server. Which have been published in the NAR WebServer Issue 2016. NAR WebServer Issue Publication - HaploGrep2. Hadoop Services for Everyone. Setting up a HTTPS Restlet Webserver.

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3 projects

4 publications

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6 older

7 4lpine

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Sebs Blog | seppinho.github.io Reviews

https://seppinho.github.io

NAR WebServer Issue Publication - mtDNA-Server. Providing Hadoop as a Service is the main goal of Cloudgene, as described in one of my previous blog entries. Since Cloudgene is only the platform, useful use cases need to be implemented and integrated in Cloudgene. Here I want to introduce our newest service called mtDNA-Server. Which have been published in the NAR WebServer Issue 2016. NAR WebServer Issue Publication - HaploGrep2. Hadoop Services for Everyone. Setting up a HTTPS Restlet Webserver.

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seppinho.github.io

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Projects – Sebs Blog

http://seppinho.github.io/projects

These are the main projects I’m currently working on:. A workflow system for Hadoop. Imputation Service based on minimac3. And Cloudgene. A cooperation with the Center of Statistical Genetics. MtDNA haplogroup classification using Phylotree. A cooperation with the Databases and Information Systems Group. At the University of Innsbruck. A NGS heteroplasmy and contamination pipeline based on Cloudgene. Including a parallelized version of BWA MEM. And in the German Chronic Kidney Disease Study GCKD.

2

Setting up a HTTPS Restlet Webserver – Sebs Blog

http://seppinho.github.io/restlet/webservice/2015/08/31/restlet

Setting up a HTTPS Restlet Webserver. For all of our services (such as Haplogrep. We are using Restlet. On server side. This blog entry summarizes the necessary steps to set up a working HTTPS Restlet Server with a valid certificate and a trusted connection. Check out the Github Repo. For the source code! Set up a Java Keystore. In a first step, a new Java Keystore needs to be created using the. Of JDK (use at least Java 7 for this):. Create a Restlet Webapp (Updated on Nov 24). Create a new Component.

3

Hadoop Services for Everyone – Sebs Blog

http://seppinho.github.io/cloudgene/docker/hadoop/2015/10/19/cloudgene-apps

Hadoop Services for Everyone. Hadoop is pretty famous for analysing huge datasets in batch (MapReduce) or in-memory (Spark). To abstract all the technical things (e.g. setting up a cluster, executing/managing Hadoop programs, HDFS Staging) from end users, Lukas. And I developed the Hadoop workflow system Cloudgene, introduced in this blog entry. Connecting new apps to Cloudgene. Imagine you are the developer of a new Hadoop application to analyse some kind of (big) data. Since you’re not interested i...

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Sebs Blog

http://seppinho.github.io/page2

Cloudgene, a Hadoop-As-A-Service approach. This post introduces the graphical Hadoop platform Cloudgene and shows how simple a Hadoop command line program (or a workflow of several programs) can be provided as a web service to everyone. Two services in Genetics based on Cloudgene are already available and showing promising success. Read more. Creating a Docker Image for Hadoop MapReduce (CDH5). There are many ways how Docker. On your local OS. Theme crafted with 3 by John Otander.

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Cloudgene, a Hadoop-As-A-Service approach – Sebs Blog

http://seppinho.github.io/cloudgene/hadoop/2015/08/27/cloudgene

Cloudgene, a Hadoop-As-A-Service approach. Already some years ago. My colleague Lukas Forer. Hadoop jar hadoop-examples.jar wordcount input output. To abstract this command we developed Cloudgene. Consisting of (a) a workflow system (including the workflow definition language WDL. Http:/ hadoop.apache.org/. Cloudgene simplified our lives a lot in the last years, and two very recent services based on Cloudgene show the success of our platform: The first service is the mtDNA-Server. Follow me on Twitter.

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Staff - Databases and Information Systems - Institute of Computer Science - University of Innsbruck

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Databases and Information Systems. Institute of Computer Science. Prof Dr. Günther Specht. Chair of research group. 43 512 507 53220. 43 512 507 53059. 2nd floor, room 3S10. Dipl-Ing. Robert Binna. 43 512 507 53237. 43 512 507 53059. 2nd floor, room 3S01. Dipl-Ing. Rainer Breuss. 2nd floor, room 3S12. Dipl-Ing. Nikolaus Krismer. 43 512 507 53304. 43 512 507 53059. 2nd floor, room 3S01. Martin Pichl, MSc. 43 512 507 53320. 43 512 507 53059. 2nd floor, room 3S01. Doris Silbernagl, MSc. 43 512 507 53249.

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Sebs Blog

NAR WebServer Issue Publication - mtDNA-Server. Providing Hadoop as a Service is the main goal of Cloudgene, as described in one of my previous blog entries. Since Cloudgene is only the platform, useful use cases need to be implemented and integrated in Cloudgene. Here I want to introduce our newest service called mtDNA-Server. Which have been published in the NAR WebServer Issue 2016. NAR WebServer Issue Publication - HaploGrep2. Hadoop Services for Everyone. Setting up a HTTPS Restlet Webserver.

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