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Sequence Quality Control Studio (SeQCoS) - Home

Sequence Quality Control Studio (SeQCoS) is an open source .NET software suite designed to perform quality control (QC) of massively parallel sequencing reads. It includes tools for evaluating sequence and base quality of reads, as well as a set of basic post-QC sequence manipulation tools. SeQCoS was written in C# and integrates functionality provided by .NET Bio and Sho libraries.

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Sequence Quality Control Studio (SeQCoS) - Home | seqcos.codeplex.com Reviews

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Sequence Quality Control Studio &#40;SeQCoS&#41; is an open source .NET software suite designed to perform quality control &#40;QC&#41; of massively parallel sequencing reads. It includes tools for evaluating sequence and base quality of reads, as well as a set of basic post-QC sequence manipulation tools. SeQCoS was written in C&#35; and integrates functionality provided by .NET Bio and Sho libraries.

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Sequence Quality Control Studio (SeQCoS) - Home | seqcos.codeplex.com Reviews

https://seqcos.codeplex.com

Sequence Quality Control Studio &#40;SeQCoS&#41; is an open source .NET software suite designed to perform quality control &#40;QC&#41; of massively parallel sequencing reads. It includes tools for evaluating sequence and base quality of reads, as well as a set of basic post-QC sequence manipulation tools. SeQCoS was written in C&#35; and integrates functionality provided by .NET Bio and Sho libraries.

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seqcos.codeplex.com

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Sequence Quality Control Studio (SeQCoS) - License

http://seqcos.codeplex.com/license

Project Hosting for Open Source Software. Sequence Quality Control Studio (SeQCoS). Apache License 2.0 (Apache). Version 2.0, January 2004. Http://www.apache.org/licenses/. TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION. 34;License" shall mean the terms and conditions for use, reproduction, and distribution as defined by Sections 1 through 9 of this document. 34;You" (or "Your") shall mean an individual or Legal Entity exercising permissions granted by this License. 3 Grant of Patent License.

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Sequence Quality Control Studio (SeQCoS) - Download: SeQCoS Version 1.0.4

http://seqcos.codeplex.com/releases/view/77797

Project Hosting for Open Source Software. Sequence Quality Control Studio (SeQCoS). SeQCoS Version 1.0.4. Nov 29, 2011. Feb 21, 2012. SeqcosInstaller-1.0.4.msi. Application, 1035K, uploaded Nov 30, 2011. You may have to uninstall older versions of SeQCoS before upgrading to this version. This step has to be done manually. Sorry about that! Fixed bugs related to /help message display for console applications. Fixed bug related to setting output directory in SeqcosUtil.exe. Reviews for this release.

3

Sequence Quality Control Studio (SeQCoS) - Issues

http://seqcos.codeplex.com/workitem/list/basic

Project Hosting for Open Source Software. Sequence Quality Control Studio (SeQCoS). SeQCos cant identify the alphabet. Dear all I was trying to run SeQCos usign the attached Ilumina dataset, but doesn´t work, the application show me the next error: Bio.QualitativeSequenceParseOne(System.IO.StreamReader): Could no. Id #16417 Release: None Updated: Dec 15, 2014 at 3:51 PM. Created: Sep 13, 2013 at 8:42 PM. Trim By Quality Score tool: enable support of all FASTQ formats. Created: Sep 3, 2012 at 7:18 PM.

4

Sequence Quality Control Studio (SeQCoS) - People

http://seqcos.codeplex.com/team/view

Are you sure you want to leave this project? Project Hosting for Open Source Software. Sequence Quality Control Studio (SeQCoS). Project Member since Oct 29, 2011. Project Member since Nov 15, 2011. Follower since May 21, 2015. Follower since Jun 6, 2014. Follower since May 14, 2012. Follower since Apr 30, 2012. Follower since Apr 8, 2012. Version 8.21.2015.21031.

5

Sequence Quality Control Studio (SeQCoS) - Source Code

http://seqcos.codeplex.com/SourceControl/list/changesets

Project Hosting for Open Source Software. Sequence Quality Control Studio (SeQCoS). To clone this project in Git. Use the following command:. Read up on using Git with CodePlex. Dec 19, 2014. Update README.txt to reflect new Git VCS. Dec 19, 2014. Initial import of .gitignore. Dec 19, 2014. Re-organize file structure for Git. Dev to be moved to its own branch. Move Main contents up a level. By [TFS04]\Project C. Oct 1, 2012. By [TFS04]\Project C. Oct 1, 2012. Checked in by server upgrade. Sep 4, 2012.

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CodePlex - Rickbe

http://www.codeplex.com/site/users/view/Rickbe

Project Hosting for Open Source Software. Member Since April 12, 2011. Last Visit June 11, 2015. FaST-LMM: FActored Spectrally Transformed Linear Mixed Models. Microsoft Research Biology Extension for Excel. Sequence Quality Control Studio (SeQCoS). Rick Benge is currently a community program manager for .NET Bio formerly the Microsoft Biology Foundation. He has worked in a variety of roles at Microsoft since 1984. Covering a total of 16 years both in Research and product teams.

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CodePlex - vforget

http://www.codeplex.com/site/users/view/vforget

Project Hosting for Open Source Software. Member Since June 16, 2010. Last Visit April 16, 2013. BL!P: BLAST in Pivot. No personal statement has been written. No activity in the last 60 days. BL!P: BLAST in Pivot. Image Resizer for Windows. Sequence Quality Control Studio (SeQCoS). Version 8.21.2015.21031.

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CodePlex - sjmercer

http://www.codeplex.com/site/users/view/sjmercer

Project Hosting for Open Source Software. Member Since February 10, 2010. Last Visit September 15, 2014. Microsoft Research Biology Extension for Excel. I am Director of Health and Wellbeing at Microsoft Research Connections. Among other projects, I am responsible for the .NET Bio. A collection of bioinformatics functions written in C# on the .NET platform. Check us out here on CodePlex, at http:/ bio.codeplex.com/. No activity in the last 60 days. BOW - Bioinformatics On Windows.

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.NET Bio - Home

http://bio.codeplex.com/wikipage?title=sampleapps&referringTitle=Home&ANCHOR

Project Hosting for Open Source Software. By clicking Delete, all history, comments and attachments for this page will be deleted and cannot be restored. Change History (all pages). Biologists and laboratory technicians who manage next generation genomic sequencing data for alignment, assembly, and/or BLAST identification will find this application useful. Alternate applications may provide similar functionality, however this implementation exposes the capabilities of .NET Bio. Biology Extension for Excel.

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seqcos.codeplex.com

Sequence Quality Control Studio (SeQCoS) - Home

Project Hosting for Open Source Software. Sequence Quality Control Studio (SeQCoS). By clicking Delete, all history, comments and attachments for this page will be deleted and cannot be restored. Change History (all pages). Sequence Quality Control Studio (SeQCoS) is an open source .NET software suite designed to perform quality control of massively parallel sequencing reads. Dec 19, 2014 - SeQCoS has migrated from TFS version control to Git. Dec 15, 2014. Minimum read length; or. However, users are free...

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