SILKBASE.AB.A.U-TOKYO.AC.JP

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1 Mita, K. et al. (2003) The construction of an EST database for Bombyx mori and its application. Proc. Natl. Acad. Sci. USA. 100: 14121-14126. 2 Mita, K. et al. (2004) The genome sequence of silkworm, Bombyx mori. DNA Res. 11: 27-35. 3 Goldsmith, M. R. et al. (2005) The genetics and genomics of the silkworm, Bombyx mori. Ann. Rev. Entomol. 50: 71-100. Search cDNA clones and GeneModels by keyword, etc. About cDNA libraries (from which the ESTs were derived). Link - Genetic Resources. The maintenance and ...

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SilkBase | silkbase.ab.a.u-tokyo.ac.jp Reviews

<META> DESCRIPTION

1 Mita, K. et al. (2003) The construction of an EST database for Bombyx mori and its application. Proc. Natl. Acad. Sci. USA. 100: 14121-14126. 2 Mita, K. et al. (2004) The genome sequence of silkworm, Bombyx mori. DNA Res. 11: 27-35. 3 Goldsmith, M. R. et al. (2005) The genetics and genomics of the silkworm, Bombyx mori. Ann. Rev. Entomol. 50: 71-100. Search cDNA clones and GeneModels by keyword, etc. About cDNA libraries (from which the ESTs were derived). Link - Genetic Resources. The maintenance and ...

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1 silkbase

2 about silkbase

3 bombyx mori

4 lepidoptera bombycidae

5 blast

6 against cdna sequences

7 libraries

8 bombyx mandarina

9 against fosmid sequences

10 trilocha varians

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silkbase,about silkbase,bombyx mori,lepidoptera bombycidae,blast,against cdna sequences,libraries,bombyx mandarina,against fosmid sequences,trilocha varians,against assembled rna seq,ernolatia moorei,samia cynthia ricini,lepidoptera saturniidae,jsps,jsaez

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SilkBase | silkbase.ab.a.u-tokyo.ac.jp Reviews

https://silkbase.ab.a.u-tokyo.ac.jp

1 Mita, K. et al. (2003) The construction of an EST database for Bombyx mori and its application. Proc. Natl. Acad. Sci. USA. 100: 14121-14126. 2 Mita, K. et al. (2004) The genome sequence of silkworm, Bombyx mori. DNA Res. 11: 27-35. 3 Goldsmith, M. R. et al. (2005) The genetics and genomics of the silkworm, Bombyx mori. Ann. Rev. Entomol. 50: 71-100. Search cDNA clones and GeneModels by keyword, etc. About cDNA libraries (from which the ESTs were derived). Link - Genetic Resources. The maintenance and ...

INTERNAL PAGES

silkbase.ab.a.u-tokyo.ac.jp

1

How to request

http://silkbase.ab.a.u-tokyo.ac.jp/nbrp/request2.html

Please check the clone name on ". The Library name of distributable clones and the price are listed below. Avarable Library name list. You can order the clones by.

2

SearchView

http://silkbase.ab.a.u-tokyo.ac.jp/cgi-bin/download.cgi

Download multi FASTA sequence file. The construction of this database has been supported by. Grant-in-Aid for Publication of Scientific Research Results,. Japan (1999-2003, 2005-2015). The EST sequencing was supported by the Genome Analysis Program,National Bioresource Project ( NBRP. Grants-in-Aid for Scientific Research, MEXT. And the Agrigenome Program, NIAS/MAFF. The maintenance and distribution of the DNA clones are supported by the National Bioresource Project ( NBRP. Link - Genetic Resources.

3

BlastExecute

http://silkbase.ab.a.u-tokyo.ac.jp/cgi-bin/blast.cgi?taxo_name=Bombyx_mandarina

ORF from Assembled RNA-seq (blastx or blastp). Mold Mitochondrial; . (4). Ciliate Nuclear; . (6). Alternative Yeast Nuclear (12). Flat master-slave with identities. Flat master-slave without identities. The construction of this database has been supported by. Grant-in-Aid for Publication of Scientific Research Results,. Japan (1999-2003, 2005-2015). The EST sequencing was supported by the Genome Analysis Program,National Bioresource Project ( NBRP. Grants-in-Aid for Scientific Research, MEXT.

4

BlastExecute

http://silkbase.ab.a.u-tokyo.ac.jp/cgi-bin/blast.cgi?taxo_name=Trilocha_varians

ORF from Assembled RNA-seq (blastx or blastp). Mold Mitochondrial; . (4). Ciliate Nuclear; . (6). Alternative Yeast Nuclear (12). Flat master-slave with identities. Flat master-slave without identities. The construction of this database has been supported by. Grant-in-Aid for Publication of Scientific Research Results,. Japan (1999-2003, 2005-2015). The EST sequencing was supported by the Genome Analysis Program,National Bioresource Project ( NBRP. Grants-in-Aid for Scientific Research, MEXT.

5

SearchView

http://silkbase.ab.a.u-tokyo.ac.jp/cgi-bin/library2.cgi?taxo_id=30250

The construction of this database has been supported by. Grant-in-Aid for Publication of Scientific Research Results,. Japan (1999-2003, 2005-2015). The EST sequencing was supported by the Genome Analysis Program,National Bioresource Project ( NBRP. Grants-in-Aid for Scientific Research, MEXT. And the Agrigenome Program, NIAS/MAFF. The maintenance and distribution of the DNA clones are supported by the National Bioresource Project ( NBRP. Link - Genetic Resources. Link - Genetic Resources.

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sericulturesyau.org

http://www.sericulturesyau.org/index.asp

silkworm.nbrp.jp

National BioResource Project （NBRP）Silkworm

http://silkworm.nbrp.jp/index_en.html

Silkworms have been domesticated for a long time because it can no longer survive in the wild, namely, all wild types are extinct. The genomes of eighteen Bombyx mori strains and two B. mandarina ones have been re-sequenced by NGS and published in DDBJ/NCBI. The raw sequence reads can be downloaded at. Http:/ trace.ddbj.nig.ac.jp/DRASearch/submission? You can search the sequence data using BLAST at. Http:/ silkbase.ab.a.u-tokyo.ac.jp/cgi-bin/blast.cgi?

nbrp.jp

NBRP : National BioResource Project (NBRP Information Site)

http://www.nbrp.jp/about/genomeDetail.jsp;jsessionid=DB960AB2A7AFD24EDEC37E59ACD22551.lb1

Information Center Upgrading Program. Fundamental Technologies Upgrading Program. Genome Information Upgrading Program. Downloads of resource logos. Resource images (requires password). Last update: Aug 23, 2016. NBRP Genome Information Upgrading Program. NBRP Genome Information Upgrading Program. 201510 - 2016.3. 20144 - 2015.3. 20124 - 2013.3. 20114 - 2012.3. 20104 - 2011.3. 20094 - 2010.3. 20084 - 2009.3. 20074 - 2008.3. 201510 - 2016.3. Genome Re-sequencing of Diverse Strains. The University of Tokyo.

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silkbase.ab.a.u-tokyo.ac.jp

SilkBase

1 Mita, K. et al. (2003) The construction of an EST database for Bombyx mori and its application. Proc. Natl. Acad. Sci. USA. 100: 14121-14126. 2 Mita, K. et al. (2004) The genome sequence of silkworm, Bombyx mori. DNA Res. 11: 27-35. 3 Goldsmith, M. R. et al. (2005) The genetics and genomics of the silkworm, Bombyx mori. Ann. Rev. Entomol. 50: 71-100. Search cDNA clones and GeneModels by keyword, etc. About cDNA libraries (from which the ESTs were derived). Link - Genetic Resources. The maintenance and ...

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