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about single-particle cryo-electron microscopy reconstruction software SIMPLE 2.1

SIMPLE (Single-particle IMage Processing Linux Engine) is user friendly software for ab initio cryo-electron microscopy single-particle reconstruction

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about single-particle cryo-electron microscopy reconstruction software SIMPLE 2.1 | simplecryoem.com Reviews
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SIMPLE (Single-particle IMage Processing Linux Engine) is user friendly software for ab initio cryo-electron microscopy single-particle reconstruction
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about single-particle cryo-electron microscopy reconstruction software SIMPLE 2.1 | simplecryoem.com Reviews

https://simplecryoem.com

SIMPLE (Single-particle IMage Processing Linux Engine) is user friendly software for ab initio cryo-electron microscopy single-particle reconstruction

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1

Positions

http://www.simplecryoem.com/positions.html

Two Postdoctoral Fellows, transcription biochemistry/structural biology. Refine established protocols for large-scale isolation of transcription regulatory complexes from yeast. Conduct DNA binding, DNA topology and run-off transcription assays. Sample preparation for cryo-EM. Sample preparation for cross-linking MS/MS experiments. Cryo-EM data acquisition in collaboration with platform personnel. Image processing for cryo-EM (2D/3D/multi-particle analysis). PhD in relevant subject area. 5 years of compu...

2

manuals for SIMPLE 2.1

http://www.simplecryoem.com/manuals.html

Manuals for SIMPLE 2.1. Command line dictionary.pdf. Supports both SPIDER (. Formats for image stacks and volumes. The MRC file handling classes are shared with the Frealix. Program for helical reconstruction. Relion. Uses the convention that MRC stacks have the suffix. And volumes the suffix. This is to overcome the annoyance that it is not possible to tell from an MRC file header whether a MRC file is a volume or a stack. With SIMPLE you can select to use either the. Syntax of the form. Dfx=256 dfy=2&#...

3

about single-particle cryo-electron microscopy reconstruction software SIMPLE 1.0

http://www.simplecryoem.com/2.0/index.html

Content on this page requires a newer version of Adobe Flash Player. Everything should be made as SIMPLE as possible, but no simpler. Single-particle IMage Processing Linux Engine (SIMPLE 2.0). 3D reconstruction, heterogeneity analysis, and refinement (programs simple cluster. Back-end consists of an object-oriented numerical library with a single external dependency the Fastest Fourier Transform in the West ( FFTW. SIMPLE 1.0 can be found here. SIMPLE 2.1 can be found here.

4

about single-particle cryo-electron microscopy reconstruction software SIMPLE

http://www.simplecryoem.com/1.0/index.html

Content on this page requires a newer version of Adobe Flash Player. Everything should be made as SIMPLE as possible, but no simpler. About SIMPLE 1.0. Single-particle IMage Processing Linux Engine 1.0 ( SIMPLE. 3D reconstruction (programs cluster. Heterogeneity analysis (programs cluster. And high-resolution refinement (programs align,. The SIMPLE back-end consists of an object-oriented numerical library with a single external dependency - the Fastest Fourier Transform in the West ( FFTW.

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EM Software : EMDataBank

http://www-ebi.emdatabank.org/emsoftware.html

EMDB map entries, 1484 PDB coordinate entries PDBe. One-stop shop for 3DEM deposition and retrieval. EM Data Bank Access. Listed below are software programs used in the generation, analysis, and fitting of 3D maps from electron microscopy images. The starting point for the list was the EM software wiki page. Please send corrections/additions to help@emdatabank.org. Click on the Program. Table headers to change the sort order. Http:/ www.ual.es/ jjfdez/SW/embfactor.html. Http:/ blake.bcm.edu/EMAN/. Script...

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EM Software : EMDataBank

http://www.emdatabank.org/emsoftware.html

EMDB map entries, 1180 PDB coordinate entries PDBe. One-stop shop for 3DEM deposition and retrieval. EM Data Bank Access. Listed below are software programs used in the generation, analysis, and fitting of 3D maps from electron microscopy images. The starting point for the list was the EM software wiki page. Please send corrections/additions to help@emdatabank.org. Click on the Program. Table headers to change the sort order. Http:/ www.ual.es/ jjfdez/SW/embfactor.html. Http:/ blake.bcm.edu/EMAN/. Http:/...

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about single-particle cryo-electron microscopy reconstruction software SIMPLE 2.1

Content on this page requires a newer version of Adobe Flash Player. Everything should be made as SIMPLE as possible, but no simpler. Job openings, to apply click here. About SIMPLE 2.1. Ngine is a program package for cryo-EM image processing, focusing on. Is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License. What is new in SIMPLE release 2.1? Odel generation for single-particle cryo- E. Lectron microscopy) code has undergone major revisions. Fi...

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