software-carpentry.org

Software Carpentry

Find us on GitHub. TEACHING LAB SKILLS FOR. We are searching for a new Executive Director. Please see the job description. Or read this post. The Software Carpentry Foundation. Is a non-profit volunteer organization whose members. Teach researchers basic software skills. We run over a hundred workshops a year. Build and maintain open access teaching materials. And run an instructor training program. You can request a workshop. Help improve our lessons. Or join the discussion. Learn more about our history.

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CONTACTS AT SOFTWARE-CARPENTRY.ORG

Software Carpentry

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Find us on GitHub. TEACHING LAB SKILLS FOR. We are searching for a new Executive Director. Please see the job description. Or read this post. The Software Carpentry Foundation. Is a non-profit volunteer organization whose members. Teach researchers basic software skills. We run over a hundred workshops a year. Build and maintain open access teaching materials. And run an instructor training program. You can request a workshop. Help improve our lessons. Or join the discussion. Learn more about our history.

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Software Carpentry | software-carpentry.org Reviews

https://software-carpentry.org

Find us on GitHub. TEACHING LAB SKILLS FOR. We are searching for a new Executive Director. Please see the job description. Or read this post. The Software Carpentry Foundation. Is a non-profit volunteer organization whose members. Teach researchers basic software skills. We run over a hundred workshops a year. Build and maintain open access teaching materials. And run an instructor training program. You can request a workshop. Help improve our lessons. Or join the discussion. Learn more about our history.

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v4.software-carpentry.org

Software Carpentry:

Find us on GitHub. Teaching basic lab skills. Lessons (Version 4.0). All of our materials are made available under the Creative Commons - Attribution License. You are free to use and remix them, provided that you cite Software Carpentry as the original source. Software Carpentry is volunteer non-profit organization dedicated to teaching basic computing skills to researchers. More.

lists.software-carpentry.org

lists.software-carpentry.org Mailing Lists

Listssoftware-carpentry.org Mailing Lists. Below is a listing of all the public mailing lists on lists.software-carpentry.org. Click on a list name to get more information about the list, or to subscribe, unsubscribe, and change the preferences on your subscription. To visit the general information page for an unadvertised list, open a URL similar to this one, but with a '/' and the list name appended. List administrators, you can visit the list admin overview page. Version 2.1.16.

INTERNAL PAGES

software-carpentry.org

1

Our Workshops

http://www.software-carpentry.org/workshops/index.html

Subcommittees and Task Forces. Blog Posts by Category. Blog Posts by Date. Teaching basic lab skills. A Software Carpentry workshop is hands-on two-day event that covers the core skills needed to be productive in a small research team. Short tutorials alternate with practical exercises, and all instruction is done via live coding. All workshop participants are required to abide by our code of conduct. To ensure that all attendees to have an enjoyable and fulfilling experience. Want to Know More? Universi...

2

Software Carpentry: Lessons Learned

http://www.software-carpentry.org/blog/2013/06/lessons-learned.html

Subcommittees and Task Forces. Blog Posts by Category. Blog Posts by Date. Teaching basic lab skills. Software Carpentry: Lessons Learned. Space Telescope Science Institute). Queen Mary, University of London). Space Telescope Science Institute). Queen Mary, University of London). University of British Columbia). Edinburgh Parallel Computing Centre). University of California, Berkeley). Lynne J. Williams. From Red to Green. Small Things Add Up. This is where Software Carpentry comes in. We ran 92 two-...

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lappland.io

Scientific peer-review as web-annotations: an experiment - Lappland. Inside Out.

http://lappland.io/blog/2014/03/open-peer-review-as-annotations

Lappland. Inside Out. Scientific peer-review as web-annotations: an experiment. Mon 24 March 2014. Recently I was invited by the journal F1000 Research. To review an article about Software Carpentry. Platform. What follows is an account of what motivated me to experiment with this, and what resulted from it. One step in fixing peer-review: open reviews. Are strictly open and associated with the reviewer's identity. Why the peer-review process is still loathsome. Perhaps most importantly, a reader of the.

training.vi-seem.eu

Python

https://training.vi-seem.eu/index.php/hpc/development/python

Domain Specific Software and Tools. Climate Software and tools. Digital Cultural Heritage Software and tools. Life Science Software and tools. Code Improvement and Debugging. Characteristics, technical parameters and special features of distributed informational system DICOM Network. Introduction in Parallel Programming and Optimization for Intel Xeon Phi Architecture. VI-SEEM National Dissemination Event with support of AITT DICOM Network. VI-SEEM Life sciences and Climate national training event. Pytho...

bioinformaticszen.com

Bioinformatics Zen - What's the point of writing good scientific software?

http://www.bioinformaticszen.com/post/whats-the-point-of-writing-good-scientific-software

What's the point of writing good scientific software? Published Fri February 8 2013. Software written by academics has a reputation of being poorer quality than that of software written by professional software developers. This poorer quality can be quantified by a lack of documentation, a non-intuitive interface, or bug-ridden with a tendency to crash. I assume, since you're reading a bioinformatics blog, that you've experienced trying to use code that you can't download, won't compile, won't run...

ascl.net

ASCL.net - Astrophysics Source Code Library

http://ascl.net/wordpress

Astrophysics Source Code Library. Making codes discoverable since 1999. July 2016 additions to the ASCL. Twenty codes were added to the ASCL in July 2016:. AGNfitter: SED-fitting code for AGN and galaxies from a MCMC approach. AstLib: Tools for research astronomers. Atlas2bgeneral: Two-body resonance calculator. Atlas3bgeneral: Three-body resonance calculator. BLS: Box-fitting Least Squares. BoxRemap: Volume and local structure preserving mapping of periodic boxes. HfS: Hyperfine Structure fitting tool.

andy.terrel.us

Codematician

http://andy.terrel.us/blog/2013/11/21/joining-big-data-brain-drain

Joining the Big Data Brain Drain. Nov 21, 2013 by Andy R. Terrel. So long academia and thanks for all the debates! Today is my last day of a wonderful three years at the University of Texas at Austin. Starting Monday, following Jake Vanderplas' terminology. I join the big data brain drain. I will be joining Continuum Analytics a their Chief Computational Scientist, with a focus of helping them join HPC technologies to the Big Data world. But that is another story. Started using the software. After gradua...

training.vi-seem.eu

Version Control

https://training.vi-seem.eu/index.php/hpc/practical-hpc/version-control

Domain Specific Software and Tools. Climate Software and tools. Digital Cultural Heritage Software and tools. Life Science Software and tools. Code Improvement and Debugging. Characteristics, technical parameters and special features of distributed informational system DICOM Network. Introduction in Parallel Programming and Optimization for Intel Xeon Phi Architecture. VI-SEEM National Dissemination Event with support of AITT DICOM Network. VI-SEEM Life sciences and Climate national training event. As te...

blog.mothur.org

mothur and QIIME

http://blog.mothur.org/2016/01/12/mothur-and-qiime

Jan 12, 2016 PD Schloss 32 min read. Despite their differences in philosophy, most. I have gotten this question with growing frequency over the past months (hence this blog post) and I know that the topic recently came up over at the QIIME forum. Finally, I like mothur for some of its unique features but QIIME is better for others and is backed up by a very strong group of bioinformatics tools and researchers, in my opinion you should consider using QIIME in future studies. So, what are the differences?

geohackweek.github.io

Introductory Material

https://geohackweek.github.io/Introductory

Getting Started with Git. This lesson is a template for creating geohackweek. It is based on the lesson template used in Data Carpentry. How can I use conda in managing all the libraries for my projects. How to use Docker? Getting Started with Git. What is Git and Github? Why are we using Git? What have we learned?

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Software Carpentry

Find us on GitHub. TEACHING LAB SKILLS FOR. We are searching for a new Executive Director. Please see the job description. Or read this post. The Software Carpentry Foundation. Is a non-profit volunteer organization whose members. Teach researchers basic software skills. We run over a hundred workshops a year. Build and maintain open access teaching materials. And run an instructor training program. You can request a workshop. Help improve our lessons. Or join the discussion. Learn more about our history.

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