The Solanaceae Genomics Resource (SGR) is a USDA/NSF funded project that provides annotation for gene and transcript sequences from solanaceae species. The SGR provides uniform annotation for gene and transcript sequence from many solanaceae species.
http://solanaceae.plantbiology.msu.edu/
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Spud DB | solanaceae.plantbiology.msu.edu Reviews
https://solanaceae.plantbiology.msu.edu
The Solanaceae Genomics Resource (SGR) is a USDA/NSF funded project that provides annotation for gene and transcript sequences from solanaceae species. The SGR provides uniform annotation for gene and transcript sequence from many solanaceae species.
solanaceae.plantbiology.msu.edu
Potato (Solanum tuberosum group Phureja DM1-3) Genome Browser v4.03: chr01:1..60000
http://solanaceae.plantbiology.msu.edu/cgi-bin/gbrowse/potato
Recenter on this region. Dump selection as FASTA. Back to Spud DB website]. Spud DB Genome Browser. Potato (Solanum tuberosum group Phureja DM1-3) PGSC v4.03 Pseudomolecules. Showing 60 kbp from chr01, positions 1 to 60,000. Search using a sequence name, gene name, locus, or other landmark. The wildcard character * is allowed. Click one of the rulers to center on a location, or click and drag to select a region. Use the Scroll/Zoom buttons to change magnification and position. Solcap snp c1 4595. Control...
Spud DB and Plant Genomics Links
http://solanaceae.plantbiology.msu.edu/links.shtml
The Buell Lab Homepage. Numerous plant bioinformatic resources are available from the Buell lab. The Plant Biology Department at MSU. Plant biology research from molecules to ecosystems at Michigan State University. International Potato Center (CIP). United States Potato Genebank. University of Maine Cooperative Extension Potato Program. The British Potato Variety Database. The European Cultivated Potato Database. The Potato Assocation of America (Varieties and Breeding). Bill Fry's Lab at Cornell.
Spud DB FAQs
http://solanaceae.plantbiology.msu.edu/FAQ.shtml
How Can I Export Search Results to a Spreadsheet? If the data is formatted as an HTML table, you should be able to select the table in your browser and copy and paste it directly into Excel (or any other modern spreadsheet application). This has been tested and found to be working on our site using Firefox - Microsoft Excel on Mac OS X, and Firefox - Gnumeric on Linux. Can You Provide Me With a Current Set of All Known Solanaceae Proteins? Do You Have Questions? Feel free to contact us. Photos courtesy o...
Spud DB Breeder's Assistant
http://solanaceae.plantbiology.msu.edu/breeder_assistant.shtml
Data-mine the SolCAP 250 Clone Diversity Panel for Phenotype and Genotype Data. To data-mine the SolCAP 250 clone diversity panel ( Hirsch et al. 2013. For phenotype and genotype data from the SolCAP 8303 Infinium Array. Launch SolCAP 250 Tool. Data-mine the SolCAP 250 Clone Diversity Panel for Phenotype Data. To data-mine the SolCAP 250 clone diversity panel ( Hirsch et al. 2013. For phenotype data from the SolCAP 8303 Infinium Array. Launch SolCAP 250 Phenotype Tool. Launch SolCAP 250 Genotype Tool.
PGSC Data Download
http://solanaceae.plantbiology.msu.edu/pgsc_download.shtml
Potato Genome Sequencing Consortium Public Data Release. Sequence files and other related information for the Potato Genome Sequencing Consortium (PGSC). The PGSC has sequenced two potato species: the heterozygous diploid. Group Tuberosum cultivar, RH89-039-16 (RH), and the doubled monoploid. Group Phureja clone DM1-3 (DM). For publication using the v4.04 pseudomolecules, please cite the following article:. Plant Cell, doi:10.1105/tpc.15.00538. View the article here. View the article here. November 14, 2...
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Marker to sequence
https://www.transplant.wageningenur.nl/marker2seq;jsessionid=df22aa0d697f5c18295c045b8eae
Search by Accession name. Search by Accession number. Search by phenotype data. Search by Passport data. Show Accessions on Google map. Select population and experiment. EU transplant public site. TransPLANT Tools and Data. QTL candidate gene prioritization. Snakemake pipeline for Maker. Canadian Potato Genome Project. Centre for BioSystems Genomics (CBSG). The Potato Genome Sequencing Consortium. The Virtual Lab for Plant Breeding. Before using this tool. For example, for beta-carotene you may fill:.
Login
https://www.eu-sol.wur.nl/uploadToDatabase/FileSelect.do;jsessionid=ca8e74d9db375d9c4775e043bbc2
Search by Accession name. Search by Accession number. Search by phenotype data. Search by Passport data. Show Accessions on Google map. Select population and experiment. Canadian Potato Genome Project. Centre for BioSystems Genomics (CBSG). The Potato Genome Sequencing Consortium. The Virtual Lab for Plant Breeding. Please enter your user credentials.
Login
https://www.eu-sol.wur.nl/uploadToDatabase/TraitForm.do;jsessionid=ca8e74d9db375d9c4775e043bbc2
Search by Accession name. Search by Accession number. Search by phenotype data. Search by Passport data. Show Accessions on Google map. Select population and experiment. Canadian Potato Genome Project. Centre for BioSystems Genomics (CBSG). The Potato Genome Sequencing Consortium. The Virtual Lab for Plant Breeding. Please enter your user credentials.
BreeDB Tutorial
https://www.eu-sol.wur.nl/tutorial/index.jsp;jsessionid=ca8e74d9db375d9c4775e043bbc2
Search by Accession name. Search by Accession number. Search by phenotype data. Search by Passport data. Show Accessions on Google map. Select population and experiment. Canadian Potato Genome Project. Centre for BioSystems Genomics (CBSG). The Potato Genome Sequencing Consortium. The Virtual Lab for Plant Breeding.
Login
https://www.eu-sol.wur.nl/uploadToDatabase/UnitForm.do;jsessionid=ca8e74d9db375d9c4775e043bbc2
Search by Accession name. Search by Accession number. Search by phenotype data. Search by Passport data. Show Accessions on Google map. Select population and experiment. Canadian Potato Genome Project. Centre for BioSystems Genomics (CBSG). The Potato Genome Sequencing Consortium. The Virtual Lab for Plant Breeding. Please enter your user credentials.
Search by accession ID
https://www.eu-sol.wur.nl/passport/SelectAccessionByAccessionID.jsp;jsessionid=ca8e74d9db375d9c4775e043bbc2
Search by Accession name. Search by Accession number. Search by phenotype data. Search by Passport data. Show Accessions on Google map. Select population and experiment. Canadian Potato Genome Project. Centre for BioSystems Genomics (CBSG). The Potato Genome Sequencing Consortium. The Virtual Lab for Plant Breeding. Search collection for Accession identifier. Enter (part of) an accession number to retrieve passport data. A valid accession number is for example: EA00001.
Search by Accession name
https://www.eu-sol.wur.nl/passport/SelectAccessionByAlias.jsp;jsessionid=ca8e74d9db375d9c4775e043bbc2
Search by Accession name. Search by Accession number. Search by phenotype data. Search by Passport data. Show Accessions on Google map. Select population and experiment. Canadian Potato Genome Project. Centre for BioSystems Genomics (CBSG). The Potato Genome Sequencing Consortium. The Virtual Lab for Plant Breeding. Search collection for Accession name. Search the database using a (partial) accession/ cultivar name pattern (e.g. ailsa craig, ailsa, or craig).
Login
https://www.eu-sol.wur.nl/uploadToDatabase/MethodForm.do;jsessionid=ca8e74d9db375d9c4775e043bbc2
Search by Accession name. Search by Accession number. Search by phenotype data. Search by Passport data. Show Accessions on Google map. Select population and experiment. Canadian Potato Genome Project. Centre for BioSystems Genomics (CBSG). The Potato Genome Sequencing Consortium. The Virtual Lab for Plant Breeding. Please enter your user credentials.
Links to partner sites
https://www.eu-sol.wur.nl/links.jsp;jsessionid=ca8e74d9db375d9c4775e043bbc2
Search by Accession name. Search by Accession number. Search by phenotype data. Search by Passport data. Show Accessions on Google map. Select population and experiment. Canadian Potato Genome Project. Centre for BioSystems Genomics (CBSG). The Potato Genome Sequencing Consortium. The Virtual Lab for Plant Breeding. Canadian Potato Genome Project. Centre for BioSystems Genomics (CBSG). The Potato Genome Sequencing Consortium. The Virtual Lab for Plant Breeding.
Login
https://www.eu-sol.wur.nl/uploadToDatabase/TemplateFiles.do;jsessionid=ca8e74d9db375d9c4775e043bbc2
Search by Accession name. Search by Accession number. Search by phenotype data. Search by Passport data. Show Accessions on Google map. Select population and experiment. Canadian Potato Genome Project. Centre for BioSystems Genomics (CBSG). The Potato Genome Sequencing Consortium. The Virtual Lab for Plant Breeding. Please enter your user credentials.
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solanaceae-garden.blogspot.com
Solanaceae Garden
Söndag 23 mars 2014. För ett par veckor sedan beställde jag några olika sorters humle från England. Denna gång var det inte humlekottar eller pellets utan rotbitar för att peta ner i marken hemma i trädgården. Jag ville ha en blandning av olika användbara sorter och valde därför två tyska, en amerikansk och en engelsk. De är Hallertau, Perle, Cascade samt Target. Nu återstår bara att se hur plantorna etablerar sig och hur smaken på kottarna blir i det skånska klimatet. Onsdag 5 februari 2014. Nästa gång ...
Solanaceae Homepage
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solanaceae.plantbiology.msu.edu
Spud DB
March 28, 2014 - A paper. Describing the resources, tools and data available in Spud DB has been published in the journal The Plant Genome. Spud DB is a collection of datasets and data-mining tools to view and analyze the potato genome, including tools to facilitate breeding improved cultivars. By the International Potato Genome Sequencing Consortium (PGSC). The assembled potato genome is that of the doubled monoploid. Group Phureja DM1-3 (DM; AEWC00000000. Group Tuberosum RH89-039-16 (RH; ERP000627.
Solanaceae85 (Solanaceae) - DeviantArt
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solanaceaeconference2016photos.wordpress.com
Solanaceae Conference 2016 • – University of California, Davis
University of California, Davis. Photos by Tamara Miller. Click on image thumbnails below to view photo in larger size in a slideshow format. Photos by Tamara Miller. This is a text widget. The Text Widget allows you to add text or HTML to your sidebar. You can use a text widget to display text, links, images, HTML, or a combination of these. Edit them in the Widget section of the Customizer. Create a free website or blog at WordPress.com.
Solanaceaes - DeviantArt
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Solanaceae Source | A global taxonomic resource for the nightshade family
Skip to main content. Log in using OpenID. Log in using OpenID. A global taxonomic resource for the nightshade family. Welcome to Solanaceae Source. The National Science Foundation (NSF). Funded the Solanum project as part of the Planetary Biodiversity Inventories (PBI). In 2011 we added the names for all members of the family to the resource with the collaboration of the International Plant Names Index ( IPNI. That is contributing the the Global Strategy for Plant Conservation. Solanum leptopodum van Hu...
