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Stem Cell Commons | Promoting Discovery and Reproducibility in Stem Cell Research

Skip to main content. Promoting Discovery and Reproducibility in Stem Cell Research. Browse and explore experiments by organism, disease, cell type or assays performed. Search experiments by keywords and filter results or look up the activity of genes of interest. Analyze assays and identify pathways or functions of gene lists using Refinery workflows. Visualize next-generation sequencing data using the genome browser and other tools. Can stem cells cause and cure cancer? If the thought of a post workout...

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Stem Cell Commons | Promoting Discovery and Reproducibility in Stem Cell Research | stemcellcommons.org Reviews

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Skip to main content. Promoting Discovery and Reproducibility in Stem Cell Research. Browse and explore experiments by organism, disease, cell type or assays performed. Search experiments by keywords and filter results or look up the activity of genes of interest. Analyze assays and identify pathways or functions of gene lists using Refinery workflows. Visualize next-generation sequencing data using the genome browser and other tools. Can stem cells cause and cure cancer? If the thought of a post workout...

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Stem Cell Commons | Promoting Discovery and Reproducibility in Stem Cell Research | stemcellcommons.org Reviews

https://stemcellcommons.org

Skip to main content. Promoting Discovery and Reproducibility in Stem Cell Research. Browse and explore experiments by organism, disease, cell type or assays performed. Search experiments by keywords and filter results or look up the activity of genes of interest. Analyze assays and identify pathways or functions of gene lists using Refinery workflows. Visualize next-generation sequencing data using the genome browser and other tools. Can stem cells cause and cure cancer? If the thought of a post workout...

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Stem Cell Commons - Home

The Stem Cell Commons is currently in private beta. Sign up. To be notified when we launch. We currently do not support Microsoft Internet Explorer. And strongly recommend that you continue browsing this site with Chrome.

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stemcellcommons.org

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View | Stem Cell Commons

http://www.stemcellcommons.org/statistics

Skip to main content. Promoting Discovery and Reproducibility in Stem Cell Research. Experiments and Sample Group Count. 3,057 sample groups. DNA Methylation Profiling (Bisulfite-Seq). DNA Methylation Profiling (MeDIP-Seq). Transcription Factor Binding (ChIP-Seq). Acute Lymphocytic Leukemia (ALL). Acute Myelogenous Leukemia (AML). Acute Promyelocytic Leukemia (APL). Chronic Lymphocytic Leukemia (CLL). Chronic Myelogenous Leukemia (CML). Hairy Cell Leukemia (HCL). Primitive Neuroectodermal Tumor (PNET).

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Analyze | Stem Cell Commons

http://www.stemcellcommons.org/tools/analyze

Skip to main content. Promoting Discovery and Reproducibility in Stem Cell Research. Fri, 07/27/2012 - 15:41 - admin. We are currently developing and integrating the Refinery Platform. To enable web-based data analysis and visualization. Refinery is powered by an ISA-Tab. Compatible data repository for access to public and private data sets. Analyses are implemented as Galaxy. Workflows and executed through the Galaxy. The Stem Cell Commons Refinery. To login to the system. For user accounts and training.

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About Us | Stem Cell Commons

http://www.stemcellcommons.org/about-us

Skip to main content. Promoting Discovery and Reproducibility in Stem Cell Research. Fri, 07/27/2012 - 15:55 - admin. The Stem Cell Commons: promoting discovery and reproducibility in stem cell research. Key features of the Stem Cell Commons. Contains stem cell related experiments (see Statistics). Includes microarray and NGS data from human, mouse, rat and zebrafish. Data from multiple cell types and disease models. Carefully curated experimental metadata using controlled vocabularies. Integration of ex...

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Code | Stem Cell Commons

http://www.stemcellcommons.org/tools/code

Skip to main content. Promoting Discovery and Reproducibility in Stem Cell Research. Fri, 07/27/2012 - 15:51 - admin. All code used by the Stem Cell Commons is freely available. EXframe: https:/ bitbucket.org/mindinformatics/exframe7. The eXframe software is a reusable web-based framework that provides structured annotation of experiments and ability to publish structured data compliant with accepted standards such as ISA-Tab. EXframe is based on the Drupal. Open source content management system. Permiss...

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Current Projects | Stem Cell Commons

http://www.stemcellcommons.org/projects

Skip to main content. Promoting Discovery and Reproducibility in Stem Cell Research. Cell type specific analysis of gene translation profiles in a kidney injury model (McMahon Lab). GFP-TRAP was used to profile expression in four kidney cell populations during renal ischemia reperfusion injury (IRI) to explore early events that occur during kidney injury and identify biomarkers for detecting progressive kidney injury. Made possible with funding from the Harvard Stem Cell Institute.

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discovery.hsci.harvard.edu

Harvard Stem Cell Discovery Engine (SCDE)

http://discovery.hsci.harvard.edu/index.html

Harvard Stem Cell Discovery Engine. Integrated access to tissue and cancer stem cell experimental information and molecular profiling analysis tools. Please note that we have merged the SCDE data into the new Stem Cell Commons. What is the SCDE? Harvard Stem Cell Institute.

hsci.harvard.edu

HSCI Community Hub | Harvard Stem Cell Institute (HSCI)

http://hsci.harvard.edu/hsci-community

Skip to main content. Https:/ www.facebook.com/HarvardStemCell. Http:/ www.youtube.com/HarvardStemCell. Subscribe to Mailing List. 10 Big Questions to Dissect Science Papers. Based on a lecture by M. William Lensch, Ph.D. Tissue development 'roadmap' created to guide stem cell medicine. Computer algorithm also provides ‘quality assurance’ for lab-created cells. Harvard Medical School Behind the Science:. A conversation with George Q. Daley. Amar Sahay, PhD, to pursue new work with NIMH grant. Center for ...

hsci.harvard.edu

Core Facilities | Harvard Stem Cell Institute (HSCI)

http://hsci.harvard.edu/core-facilities

Skip to main content. Https:/ www.facebook.com/HarvardStemCell. Http:/ www.youtube.com/HarvardStemCell. Subscribe to Mailing List. HSCI iPS Core Facility. In July 2008, the HSCI iPS Core Facility. HSCI Therapeutic Screening Center. The HSCI Therapeutic Screening Center was established to take comprehensive advantage of some of the unique aspects of stem cell biology to identify reagents and compounds that either affect cell differentiation or could be therapeutic agents themselves. The HSCI Center for St...

mindinformatics.org

Stem Cell Commons | MIND Informatics

http://www.mindinformatics.org/node/67

Skip to main content. MIND Informatics develops and applies integrative computational methods in biomedical and brain research, working with leading clinicians and researchers to understand and cure neurological disorders. The Stem Cell Commons. Was initiated by the Harvard Stem Cell Institute to develop a community for stem cell bioinformatics to promote discovery and reproducibility in stem cell research. This open source environment for sharing, processing and analyzing stem cell data brings toget...

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Software | Hidelab

https://hidelab.wordpress.com/software

Follow Win on Twitter. Why I left Harvard…. On Why I left Harvard – and…. Blog at WordPress.com.

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Stem Cell Commons | Promoting Discovery and Reproducibility in Stem Cell Research

Skip to main content. Promoting Discovery and Reproducibility in Stem Cell Research. Browse and explore experiments by organism, disease, cell type or assays performed. Search experiments by keywords and filter results or look up the activity of genes of interest. Analyze assays and identify pathways or functions of gene lists using Refinery workflows. Visualize next-generation sequencing data using the genome browser and other tools. Can stem cells cause and cure cancer? If the thought of a post workout...

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Global Stem Cells Group Symposium. September 3, 2015. Official Medical College Of Barcelona. October 9, 2015. SHERATON BUENOS AIRES HOTEL AND CONVENTION CENTER. October 15, 2015. Buenos Aires, Argentina. San Jose, Costa Rica. March 9, 2016. San Jose, Costa Rica. Global Stem Cells Group is proud to present our 2015 Edition of our Regenerative Medicine Symposium, to be held in 4 different Cities around the World. Dr Terry Grossman M.D. Grossman Wellness Center. Director. Dr Charles F. Mahl, M.D. Spanish So...