support.basespace.illumina.com

Welcome to BaseSpace Support. We are here to help you!

Welcome to BaseSpace Support. We are here to help you! User Guide →. View the User Guide (Web). Download the User Guide (PDF). View the Release Notes (PDF). Using BaseSpace with NextSeq (PDF). Analysis Files →. 6 articles →. Does Illumina access my data? How do I comply with privacy laws in my country when using BaseSpace? How does Illumina protect my data? How does Illumina use my personal information? How does the data sharing feature work? 9 articles →. Getting Started →. What are App Sessions?

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Welcome to BaseSpace Support. We are here to help you! | support.basespace.illumina.com Reviews

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Welcome to BaseSpace Support. We are here to help you! User Guide →. View the User Guide (Web). Download the User Guide (PDF). View the Release Notes (PDF). Using BaseSpace with NextSeq (PDF). Analysis Files →. 6 articles →. Does Illumina access my data? How do I comply with privacy laws in my country when using BaseSpace? How does Illumina protect my data? How does Illumina use my personal information? How does the data sharing feature work? 9 articles →. Getting Started →. What are App Sessions?

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Welcome to BaseSpace Support. We are here to help you! | support.basespace.illumina.com Reviews

https://support.basespace.illumina.com

Welcome to BaseSpace Support. We are here to help you! User Guide →. View the User Guide (Web). Download the User Guide (PDF). View the Release Notes (PDF). Using BaseSpace with NextSeq (PDF). Analysis Files →. 6 articles →. Does Illumina access my data? How do I comply with privacy laws in my country when using BaseSpace? How does Illumina protect my data? How does Illumina use my personal information? How does the data sharing feature work? 9 articles →. Getting Started →. What are App Sessions?

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support.basespace.illumina.com

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Download the User Guide (PDF) – Welcome to BaseSpace Support. We are here to help you!

https://support.basespace.illumina.com/knowledgebase/articles/197679-download-the-user-guide-pdf

Download the User Guide (PDF). Larr; User Guide. To download BaseSpace Userguide. This article was helpful. Flag this article as inaccurate. Flag this article as inaccurate. View the User Guide (Web). Download the User Guide (PDF). View the Release Notes (PDF). Using BaseSpace with NextSeq (PDF). Feedback and Knowledge Base. Run Charts and Tables. Welcome to BaseSpace Support. We are here to help you! Terms of Service and Privacy Policy. Your password has been reset. Due to a security incident.

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Knowledge Base – Welcome to BaseSpace Support. We are here to help you!

https://support.basespace.illumina.com/knowledgebase

Larr; Welcome to BaseSpace Support. We are here to help you! User Guide →. View the User Guide (Web). Download the User Guide (PDF). View the Release Notes (PDF). Using BaseSpace with NextSeq (PDF). Analysis Files →. 6 articles →. Does Illumina access my data? How do I comply with privacy laws in my country when using BaseSpace? How does Illumina protect my data? How does Illumina use my personal information? How does the data sharing feature work? 9 articles →. Getting Started →. What are App Sessions?

3

VCF File – Welcome to BaseSpace Support. We are here to help you!

https://support.basespace.illumina.com/knowledgebase/articles/144844-vcf-file

Larr; Analysis Files. The chromosome of the reference genome. Chromosomes appear in the same order as the reference FASTA file. The single-base position of the variant in the reference chromosome. For SNPs, this is the reference base with the variant; for indels or deletions, this is the reference base immediately before. The variant. Variants are ordered by position. The rs number for the SNP obtained from dbSNP.txt, if applicable. The alleles that differ from the reference read. Setting in the config f...

4

Getting Started – Welcome to BaseSpace Support. We are here to help you!

https://support.basespace.illumina.com/knowledgebase/topics/21347-getting-started

Larr; Knowledge Base. What are App Sessions? What are Sample Sheets? Feedback and Knowledge Base. Run Charts and Tables. Welcome to BaseSpace Support. We are here to help you! Terms of Service and Privacy Policy. Your password has been reset. Due to a security incident. We have reset your password. We've just sent you an email to. Click the link to create a password, then come back here and sign in.

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FASTQ File Format – Welcome to BaseSpace Support. We are here to help you!

https://support.basespace.illumina.com/knowledgebase/articles/144842-fastq-file-format

Larr; Analysis Files. FASTQ file is a text-based file format that contains base calls and quality values per read. Each record is represented by four lines:. A plus sign . The quality scores in an ASCII encoded format. The identifier is formatted as @Instrument:RunID:FlowCellID:Lane:Tile:X:Y ReadNum:FilterFlag:0:SampleNumber. As shown in the following example:. 9=AAAAAAAAAA9#: # ;? This article was helpful. Flag this article as inaccurate. Flag this article as inaccurate. Feedback and Knowledge Base.

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help.basespace.illumina.com

How to delete data and restore

https://help.basespace.illumina.com/articles/tutorials/delete-data-and-restore

How to delete data and restore. How to delete data and restore. Within Hub, users are able to manage the data in their accounts through a few mechanisms, one of which is the ability to Delete. BaseSpace Hub Users have the ability to delete:. In order to delete any data from BaseSpace Hub, you must be the owner. If you delete something that you do not own, it will be removed from your account and you will no longer be a collaborator for that dataset. Option available in the top menu. In the Runs list, cli...

help.basespace.illumina.com

How to Combine Samples

https://help.basespace.illumina.com/articles/tutorials/combine-samples

How to Combine Samples. How to Combine Samples. Select the Projects icon and click on the desired project. In the Projects page, click on the Samples tab and choose the samples that you want to combine together. Once selected, click on the 'Combine' button at the top. In the pop up window, enter the name for the new combined sample and click on 'Combine'. The new combined sample appears in the list of already present samples. BaseSpace Sequence Hub UI Overview. Getting Started with BaseSpace Sequence Hub.

help.basespace.illumina.com

How to transfer ownership

https://help.basespace.illumina.com/articles/tutorials/transfer-ownership

How to transfer ownership. Click on Transfer Owner. Click on Transfer Owner. Click on Transfer Owner. Click on Transfer Owner. How to transfer ownership. This is a method to hand control of data over to a collaborator or customer. Use it:. If you want to give control of your data to a collaborator. If you sequenced samples for a customer, for example, if you are a core lab or service provider. Click on Transfer Owner. Click on Transfer Owner. Click on Transfer Owner. Click on Transfer Owner. The 'Transfe...

help.basespace.illumina.com

How to Share Data using 'Email' option

https://help.basespace.illumina.com/articles/tutorials/share-data-using-email

How to Share Data using 'Email' option. Click on Share Project. Click on Share Project. How to Share Data using 'Email' option. Click on Share Project. Select the Projects icon and select the desired Project. Select the Share button from the options available in the top menu. Click on Share Project. Select the Projects icon and click on the desired Project. Select the Share button from the options available in the Projects page. Sharing a Run shares only the Run. Projects must be shared individually.

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English (U.S.). Posted by Leanne Lloyd-Fairey on 10 March 2016 07:18 PM. This BaseManager update includes UI improvements to the following areas:. Added the zone tracking ratio as a percentage for the 3200 controller. Moved the options for linking soil moisture sensors to primary zones to the main programming page. This makes it easier to link the sensor to the zone, and it also shows the linked sensors on the main page in view mode. Quick View and Maps Tabs. Test and manually run master valves. You can ...

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Welcome to BaseSpace Support. We are here to help you!

Welcome to BaseSpace Support. We are here to help you! User Guide →. View the User Guide (Web). Download the User Guide (PDF). View the Release Notes (PDF). Using BaseSpace with NextSeq (PDF). Analysis Files →. 6 articles →. Does Illumina access my data? How do I comply with privacy laws in my country when using BaseSpace? How does Illumina protect my data? How does Illumina use my personal information? How does the data sharing feature work? 9 articles →. Getting Started →. What are App Sessions?

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