symapdb.org

SyMAP

Is an automated system for identifying and displaying genome synteny alignments. The genomes may be represented by sequenced chromosomes (pseudomolecules), by draft sequence contigs, or by FPC physical maps (with BAC-end or marker sequence). If you use results from this page in a publication or website, please reference:. Soderlund, et al. (2011) Nucl. Acids Res. Doi:10.1093/nar/gkr123 ( link. Email us at symap@agcol.arizona.edu. Select a group to view the synteny in SyMAP v4.0. Fabaceae, et al. Email: s...

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SyMAP | symapdb.org Reviews

<META> DESCRIPTION

Is an automated system for identifying and displaying genome synteny alignments. The genomes may be represented by sequenced chromosomes (pseudomolecules), by draft sequence contigs, or by FPC physical maps (with BAC-end or marker sequence). If you use results from this page in a publication or website, please reference:. Soderlund, et al. (2011) Nucl. Acids Res. Doi:10.1093/nar/gkr123 ( link. Email us at symap@agcol.arizona.edu. Select a group to view the synteny in SyMAP v4.0. Fabaceae, et al. Email: s...

<META> KEYWORDS

1 symap synteny browser

2 software

3 team

4 agcol

5 relevant links

6 symap

7 nteny m

8 apping and a

9 nalysis p

10 rogram v4 0

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symap synteny browser,software,team,agcol,relevant links,symap,nteny m,apping and a,nalysis p,rogram v4 0,quick tour,user guide,problems or requests,sample multi genome alignments,poaceae,rosaceae curcurbiteae,mummer,and blat

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SyMAP | symapdb.org Reviews

https://symapdb.org

Is an automated system for identifying and displaying genome synteny alignments. The genomes may be represented by sequenced chromosomes (pseudomolecules), by draft sequence contigs, or by FPC physical maps (with BAC-end or marker sequence). If you use results from this page in a publication or website, please reference:. Soderlund, et al. (2011) Nucl. Acids Res. Doi:10.1093/nar/gkr123 ( link. Email us at symap@agcol.arizona.edu. Select a group to view the synteny in SyMAP v4.0. Fabaceae, et al. Email: s...

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symapdb.org

1

SyMAP

http://www.symapdb.org/projects/fabaceae

Fabaceae, et al. We aligned the sequences of several model and agricultural plant species: two varieties of Arabidopsis (thaliana [1] and lyrata), Vitis vinifera ("common grape vine") [4], Medicago truncatula [2], Glycine max ("soybean") [5], and Populus trichocarpa ("poplar") [6]. Select one or more species of interest from the left and then click a tool button on the right. The first three tools, Dot Plot. Can be used with any number of selected species. C papaya (papaya) *. Arabidopsis Sequencing Cons...

2

SyMAP Poaceae

http://www.symapdb.org/projects/poaceae

We aligned the maps and sequences of several important cereal grasses: Zea mays ("maize") [1,2], Oryza sativa ("rice") [3,4], Brachypodium distachyon [5], Sorghum bicolor [6], and Foxtail Millet [7]. Select one or more species of interest from the left and then click a tool button on the right. The first three tools, Dot Plot. Can be used with any number of selected species. The remaining tools require one (self-alignment) or two selected species. Z mays (maize) *. S italica (foxtail millet). The Interna...

3

SyMAP Relevant links

http://www.symapdb.org/docs/links.html

On-line comparative sequenced genome databases. A few multiple alignment programs. Collaborative effort to provide information about biodiversity. On-line comparative sequenced genomes databases. Plants; Genome browsers;. Hartmann et al. 2006. Plants; Gene region alignments, Dotplot, Chromosome alignment, Multiplicon; blastp and OrthoMCL method. Proost et al. 2009. Plants; Dotplots and detail; blastp and MCSCAN. Tang et al. 2008. Grasses; Ensembl;. Liang et al. 2008. Legumes; CMap;. Frazer et al. 2004.

4

SyMAP

http://www.symapdb.org/team.html

Arizona Genomics Computational Lab. Bull; BIO5 Institute. Bull; University of Arizona.

5

SyMAP - Rosaceae

http://www.symapdb.org/projects/rosaceae

This page shows alignments of the Apple v1.0 [1] and Peach v1.0 [2] genomes to each other, as well as self-alignments of each. Cucumber scaffolds larger than 100kb have also been aligned. Select one or more species of interest from the left and then click a tool button on the right. The first three tools, Dot Plot. Can be used with any number of selected species. The remaining tools are only be available when one (self-alignment) or two species are selected. Circular display of synteny blocks. Internatio...

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pacbiobrothers.blogspot.com

パックマンの挑戦　－　PacBioシークエンサー: 3月 2015

http://pacbiobrothers.blogspot.com/2015_03_01_archive.html

パックマンの挑戦　－　PacBioシークエンサー. PacBioシークエンサーONLYの日本で唯一のブログ 2012年1月～今　　PacBio以外のことも書きます　書いてます　恐れずに. Structural Variant - 構造変異　PacBioでヒトを読んだら. 12300;Large InDel, Structural Variantの検出」を、ヒトゲノムでやるのはなかなかチャレンジングなテーマです。なぜかと言うと、昨年（2014年）まで、. 平均リード長が、長いといっても5Kb（P4）、7Kb（P5）で、長いリードでゲノムカバレッジ上げるのにセル数がたくさん必要だった. もちろん、今（2015年）でも、PacBioでヒトゲノムやるにはバイオインフォの専門家が必要です。そんな中、韓国では、Macrogenという会社が、PacBio RSII を2台、HiSeq X10を、大人買いして、韓国人ヒトゲノム解析を行いました！以下、画像は PacBio AGBT 2015のYou Tube. SyMAPというのは、比較ゲノムで用いられるツールのひとつです。 Her2（Human ...

comparative-legumes.org

Legume Information System

http://www.comparative-legumes.org/pages/resources

Search sequenced legume genomes. CViT search by sequence. Leggle Gene Family Pages. Some plant genome and gene family tools. Plant genomes and gene families. A resource for plant comparative genomics. Synteny browser for plant genomes, including. Plant genome duplication database. A database of phylogenetic trees and alignments for plants and other taxa. Descriptive information about the family. Soybean genetic and genomic data: genome browser, maps, trait and QTL data, pathways, . Static files with anno...

agcol.arizona.edu

FPC

http://agcol.arizona.edu/software/fpc

This work was funded in part by NSF grant #0213764. And by the Initiative for Future Agriculture and Food Systems Grant no. 2001-52100-11292 from the USDA Cooperative State Research, Education, and Extension Service. FPC takes as input a set of clones and their restriction fragments (called Bands) and assembles the clones into contigs; for more information, see summary. Are by the GSC, BCGSC, Sanger Centre, Clemson University, and University of Arizona. FPC downloads, tutorials, and documentation. Publis...

agcol.arizona.edu

SyMAP v4.2

http://www.agcol.arizona.edu/software/symap

Synteny Mapping and Analysis Program. Synteny Mapping and Analysis Program) is a software package for detecting,displaying, and querying syntenic relationships between sequenced chromosomes and/or FPC physical maps. The SyMAP package, which can be downloaded below, includes demo files for synteny computation using fully sequenced chromosomes, draft contig sets, and FPC physical maps. Provides instructions on the running the demo and creating projects. Explains the interactive displays.

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symap.gov.cn

天地图·沈阳

沈阳市规划和国土资源局主办沈阳市地理信息中心承办备案序号辽ICP备13009550. 地址沈阳市邮编 110004 电话 024-83180327.

symap.org.br

ONG Sylvio de Magalhães Padilha / São Paulo

symap.skyrock.com

Blog de Symap - Symap le contrat de Confiance ! - Skyrock.com

Mot de passe :. J'ai oublié mon mot de passe. Symap le contrat de Confiance! Bonjour à toi, cher visiteur. Ici c'est la Symap Boutique, un dépôt de toutes mes vieilles babioles! C'est toi qui choisiras leur futur dans ton armoire ou dans mon grenier! Ps: Je n'ai pas de grenier alors choississez plutôt l'option dans votre armoire :D. Mise à jour :. Pulls/ T-shirt : -Pull Hello Kitty, motif. Abonne-toi à mon blog! Bienvenue à la Symap Boutique! Sur Symap on utilise le Symap. J'accepte le troc . Retape dans...

symap7.skyrock.com

Blog de Symap7 - Blog de Symap7 - Skyrock.com

Mot de passe :. J'ai oublié mon mot de passe. Mise à jour :. Abonne-toi à mon blog! N'oublie pas que les propos injurieux, racistes, etc. sont interdits par les conditions générales d'utilisation de Skyrock et que tu peux être identifié par ton adresse internet (67.219.144.114) si quelqu'un porte plainte. Ou poster avec :. Retape dans le champ ci-dessous la suite de chiffres et de lettres qui apparaissent dans le cadre ci-contre. Posté le lundi 02 mars 2009 21:09. Ou poster avec :. Ou poster avec :.

symapac.com

SyMaPac - System Management Package

symapdb.org

SyMAP

Is an automated system for identifying and displaying genome synteny alignments. The genomes may be represented by sequenced chromosomes (pseudomolecules), by draft sequence contigs, or by FPC physical maps (with BAC-end or marker sequence). If you use results from this page in a publication or website, please reference:. Soderlund, et al. (2011) Nucl. Acids Res. Doi:10.1093/nar/gkr123 ( link. Email us at symap@agcol.arizona.edu. Select a group to view the synteny in SyMAP v4.0. Fabaceae, et al. Email: s...

symapefrance.com

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symapp.com

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symapplication.net

Informatique

GESTION DE LOCATION DE VOITURES. Versions Web et Locale. GESTION FORWARDER / TRANSITAIRE. Version Web (Arabe, Français). GESTION DE LOCATION DE VOITURES (GLV). L’application de gestion de location de voitures (GLV) est un logiciel permettant de gérer tous les taches suivantes dans une entreprise de location de voitures:. Gestion de la Location. Gestion et suivi de la caisse. Facturation et suivi clients. Gestion de Stock et réparations. Gestion et suivi des sinistres. Tableau de Bord l’activité. L’applic...